| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6240 |
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| Symbol | deoA |
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| ID | 4454316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008544 |
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| Strand | + |
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| Start bp | 418173 |
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| End bp | 419489 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639698305 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_839865 |
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| Protein GI | 116686618 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02643] thymidine phosphorylase
[TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.683278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.643776 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCTAC CGCAGGAATT CATTCGCAGG AAGCGTGACG GGCAGCCGCT CGATCGCGAC
GACATGGCCG CGTTCGTGCG CGGCGTGACC GACGGCAGCG TGACCGAGGG CCAGGTGGCC
GCGTTCGCGA TGGCCGTGTA TTTCAACGAC CTGAGCACCG ACGAGCGCGT CGCGCTGACG
CTCGCGCAGC GCGATTCGGG CGACGTGCTC GACTGGCGCG CACTCGATCT CGGCGGGCCG
GTGATCGACA AGCATTCGAC GGGCGGCGTC GGCGACGTCG TGTCGCTGAT GCTCGGGCCG
ATGGTGGCCG CGTGCGGCGG CTACGTGCCG ATGATCTCGG GGCGCGGGCT CGGCCATACC
GGCGGCACGC TCGACAAGTT GAGCGCGATC CCCGGTTACG ACGTGATGCC CGATACGGAT
GCGTTTCGCC GCACGGTGCG CGAGGTCGGC GTCGCGATCA TCGGGCAGAC CGCGCGGCTC
GCGCCGGCCG ACAAGCGCAT CTATGCGATC CGCGACGTGA CGGCGACCGT CGAATCGGTC
GCGATGATCA CCGCGTCGAT CTTGTCGAAG AAGCTCGCGG CGGGGCTCGA CGGGCTCGTG
ATGGACGTCA AGGTCGGCTC CGGCGCGTTC ATGCCGACCG CGGAGAAATC GGCGGAACTG
GCGCGCAGCA TCGTCGACGT CGGCAATGGC GCCGGCATGA AGACGACCGC GATCCTCACC
GACATGAACC AGTCGCTCGC GCCGTGCGCG GGCAATGCGC TCGAGGTGGC GTGCGCGATC
GACTACCTGA CGGGCAAGTC GCGTCCCGCC CGTTTGCACG ACGTGACGAT GGCGCTGTCG
GCGGAGCTGC TCGTCACCGG CGGGCTGGCG CGCGATGCCG CCCATGCGCG CGAGAAGCTG
CAGCAGGCGC TCGATTCGGG CGCGGCCGCC GAGCGTTTCG CGCGCATGGT CGCCGCGCTC
GGCGGCCCGG CCGACCTGCT CGACGCGCCC GCGCGGCATC TGGCGCGGGC GGCGGTGATC
GTGCCGGTTC CGGCTCCCGT GAGCGGCGTG GTGCAGCGGG TCGACTGCCG CGCGCTCGGG
CTCGCGGTGG TCGCGCTCGG CGGCGGCCGC ACGCGCGCGG AGGATGCGAT CGACGTCAGC
GTCGGCTTGT CGGCGCTCGC GGAGATCGGG CAGCGCATCG AGGCCGGCGA GCCGCTGGGT
TTCGTGCACG CCCGCGACGA AGCGGCCGCG GCCCACGCGG TGGATGCGAT CCGCCGCGGC
TACGTGCTCG GCGAGACCGG CGAAGCGCCG CCGACCCTTT ACCAGCGCGT CGACTGA
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| Protein sequence | MFLPQEFIRR KRDGQPLDRD DMAAFVRGVT DGSVTEGQVA AFAMAVYFND LSTDERVALT
LAQRDSGDVL DWRALDLGGP VIDKHSTGGV GDVVSLMLGP MVAACGGYVP MISGRGLGHT
GGTLDKLSAI PGYDVMPDTD AFRRTVREVG VAIIGQTARL APADKRIYAI RDVTATVESV
AMITASILSK KLAAGLDGLV MDVKVGSGAF MPTAEKSAEL ARSIVDVGNG AGMKTTAILT
DMNQSLAPCA GNALEVACAI DYLTGKSRPA RLHDVTMALS AELLVTGGLA RDAAHAREKL
QQALDSGAAA ERFARMVAAL GGPADLLDAP ARHLARAAVI VPVPAPVSGV VQRVDCRALG
LAVVALGGGR TRAEDAIDVS VGLSALAEIG QRIEAGEPLG FVHARDEAAA AHAVDAIRRG
YVLGETGEAP PTLYQRVD
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