Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6231 |
Symbol | |
ID | 4454307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | + |
Start bp | 406240 |
End bp | 407007 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639698296 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_839856 |
Protein GI | 116686609 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.247723 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0668197 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATCA AGGATCGCGT TTTTCTGATT ACGGGCGCCG GTTCCGGCCT CGGCGCCGCG GTGGCGCGCA TGGTCGTCGC GCAAGGCGGC AAGGCCGTGC TGCTGGACGT CAATGACGAG GCGGGCGCGG GTCTCGCGAA CGAACTCGGC GCGGCCGCGC GCTTCGTGAA GACCGACGTG ACGAGCGAAG CCGACGGTCA GGCGGCCGTT GCGGCCGCGC GCGACGCGTT TGGCCGCGTC GATGCGCTCG TCAACTGCGC GGGCGTCGCG CCGGGCGAGA AGGTCGTCGG CCGCGATGGC CTGCACTCGC TCGACCGCTT CGCGCGGGCG GTGTCGATCA ACCTCGTCGG CACGTTCAAC ATGATTCGGC TGGCTGCTGA AGCGATGTCG AAGCAGGACG CCGATGCGGA AGGCGAGCGC GGCGTGATCA TCAACACCGC GTCGGTCGCG GCGTTCGACG GACAGATCGG ACAGGCCGCG TATGCGGCGT CGAAGAGCGG CGTGGTGGGC ATGACGCTGC CGATCGCGCG CGAACTCGCG CGCTTCGGCA TTCGCGTCGT GACGGTCGCG CCCGGTATCT TCGCGACGCC GATGATGGCC GGCATGCCGC AGGACGTGCA GGACGCGCTC GGCAAGAGCG TGCCGTTTCC GCCGCGGCTC GGCCGCCCGG AAGAATTTGC GGCGCTGGTG CGCCACATCG CCGAGAACAC GATGCTGAAC GGCGAAGTCA TCCGTCTCGA TGGCGCGTTG CGCATGGCAC CGCGCTGA
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Protein sequence | MNIKDRVFLI TGAGSGLGAA VARMVVAQGG KAVLLDVNDE AGAGLANELG AAARFVKTDV TSEADGQAAV AAARDAFGRV DALVNCAGVA PGEKVVGRDG LHSLDRFARA VSINLVGTFN MIRLAAEAMS KQDADAEGER GVIINTASVA AFDGQIGQAA YAASKSGVVG MTLPIARELA RFGIRVVTVA PGIFATPMMA GMPQDVQDAL GKSVPFPPRL GRPEEFAALV RHIAENTMLN GEVIRLDGAL RMAPR
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