Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6229 |
Symbol | |
ID | 4454305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | - |
Start bp | 403411 |
End bp | 404415 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639698294 |
Product | AraC family transcriptional regulator |
Protein accession | YP_839854 |
Protein GI | 116686607 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.662728 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.031782 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGCCGC AGATGATTTC GCCGGATTTC GTCGACGATG CGCTCGCGTG CCTCCGCCGG CGCGACTTGC CGACCGCGCC CGTGCTGCGT GCCGCCGGGC TGCCGGCCGC CGTGCACGAG CCCGTCACGC CGCAGCAGTA CGGCCGGCTG TGGCTCGCGA TCGCCGGTAC GCTCGACGAC GAATTCTTCG GGCTGGCCGC GCGCCCGATG CGGCGCGGCA GCTTTACGCT GCTGTGTCAC GCGGTGCTGC ACGCCGGCAC GCTCGACAAG GCGCTGCGGC GCGCGCTGAA ATTCCTGCGT GTGGTGCTCG ACGAGCCGCA CGGCGAACTC GTCGTGGCCG ACGGGCAGGC GCAGGTCGTG CTGGCGCAAT CGGGCGCGCC GTATCCGGCA TTCGCGTACC GGACGTTCTG GCTGATCCTG CTCGGCGTCG CGTGCTGGCT GATCGGCCGG CGCATCCCGC TGCAGCGCAT CGATTTCGCG TGCCCGAGCC TCGGCCAGCG CAGCGACTAT CACCAGTTCT TCGGCGTCCC GGTGCATTTC GACCGGCCCG ACAGCCGGCT CGCGTTCAAC GCCGCGTACC TCGCGCTGCC GACGATCCGC TCGGAGCAGA CACTGCGGAC CTTCCTGCGC GGCGCACCCG GCAATCTCCT CGTGCGCTAC CGGCACGACA CAGGCTGGGT CGCGAAGACG CGCGCGCACC TGAAAGCGCT GCCGGCCGCC GAATGGCCCG ACTTCGACAC GCTGGCCGTG CGCCTCGACA CGACGCCCGC GACGCTGCGG CGGCGTTTGC GCAGCGAAGG GCAAAGTTTC GCGGCGATCA AGGACGAATT ACGCGGCGCG CTGGCCCAGT CGCTGCTGCG CGGGCACGCG CTCAGCGTCG CGGAGATCGC GGTCGAGCTC GGCTTCACCG AGCCGAGCGC GTTTCATCGC GCGTTCCGGA AATGGACGGG CACGAGCCCC GGTGCGTTTC GGCGCGACGT GCATGCGGCG AAGGCGGAGT CTTGA
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Protein sequence | MGPQMISPDF VDDALACLRR RDLPTAPVLR AAGLPAAVHE PVTPQQYGRL WLAIAGTLDD EFFGLAARPM RRGSFTLLCH AVLHAGTLDK ALRRALKFLR VVLDEPHGEL VVADGQAQVV LAQSGAPYPA FAYRTFWLIL LGVACWLIGR RIPLQRIDFA CPSLGQRSDY HQFFGVPVHF DRPDSRLAFN AAYLALPTIR SEQTLRTFLR GAPGNLLVRY RHDTGWVAKT RAHLKALPAA EWPDFDTLAV RLDTTPATLR RRLRSEGQSF AAIKDELRGA LAQSLLRGHA LSVAEIAVEL GFTEPSAFHR AFRKWTGTSP GAFRRDVHAA KAES
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