Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6221 |
Symbol | |
ID | 4453898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | + |
Start bp | 388845 |
End bp | 390095 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639698281 |
Product | metallophosphoesterase |
Protein accession | YP_839846 |
Protein GI | 116686599 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0420] DNA repair exonuclease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.799134 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00232711 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGAAGTTCA TCCACGCGGC AGACATTCAC CTTGACAGCC CGTTGCACGG CCTGAGCGCG TATCCCGACG CACCGGCCGC GCAGTTGCGC AACGCGTCGC GCGAGGCGCT GCGGCAACTG GTGGATCGTG CGATCGAAGA GGAAGTCGCG TTCCTCGTGA TCGCGGGCGA CCTGTACGAC GGCGACTGGA AGGATCACAA CACGGGTATC TTCTTCGGCC AGCAGATGGG GCGGTTGCGC CGGGCCGGCA TCCGTGCGTT CGTGCTCGGC GGCAACCACG ATGCCGAAAG CGAGATGACG AAGAAGCTGA CGCTGCCCGA CAACGTCACC GTGTTCGGCC ACCGCAAGCC GGAAACCGTC CGGCTGCCGG AATTCGACGT CGCGCTGCAC GGGCAGAGCT TCAAGGACAA GGCCGTCGTC GACAACCTCG CGATCGGCTA TCCGGACCCG GTGCCCGGGT ACTACAACAT CGGCGTGCTG CATACGGCGC TCGAAGGGTA TGCGGCGCAT GCGAACTATG CGCCCTGCAC GCTGGCCGAA CTGCATGCGA AAGGCTACGA CTACTGGGCG CTCGGCCACG TGCATGAATT CCAGCAATGG ACGGGCCCGT CCACCGTCGT GTTTCCCGGC AATCTGCAGG GGCGCCATAT CCGCGAGACG GGCCGGCGCG GCGCGGTGCT CGTGACGGTC GAGCAAGGCA ACACGCAGGT CGAGCGCCTG TATCTCGACG TGCTGCGCTG GGAAGCCGTG TCCGTCGATG CGTCCGATTG CCTGTCGGTG GCCGATCTGT CGAGAAAGGT CGGCCAGTCG CTGGAGACGC TGTTGACCGT CGACGGCCAT GTGCCGCGCG CGGTGCGCGT CACCGTTACC GGGCGCACCC CCGCGCACGG CCTCTTTTTC GGCCGCGCGC CGCAGTTGCG TGCGGAGGTG CTGAACCAGA TCGGCATCAT CGGCAACGAG CGGCTGTGGC TCGAGAAGGT CCGGCTCGCG ACGTCCGCGG CCGATCAGCA GCCGGGCGAA AGCGAACCGC TCGAGGCGCT GGAGGACCTG AAGCAGATCC TGGCCGACGC CGCGCACGAT CCGGATTTCC TCGCGCTGCT CGAACGCGAC CTGAAGCCGT TCGTCGGCAA GGTCCGCAGC GACGTGAAGG AGGAGGTACC GTTGTTGACG ATGGCGCGCG CGGGCGAGCT GACCGCGCTG GTCGAGCAGG TCGGGCCCGC GCTGCTCGCG CGGCTGGCGA GGGGGGAGTA A
|
Protein sequence | MKFIHAADIH LDSPLHGLSA YPDAPAAQLR NASREALRQL VDRAIEEEVA FLVIAGDLYD GDWKDHNTGI FFGQQMGRLR RAGIRAFVLG GNHDAESEMT KKLTLPDNVT VFGHRKPETV RLPEFDVALH GQSFKDKAVV DNLAIGYPDP VPGYYNIGVL HTALEGYAAH ANYAPCTLAE LHAKGYDYWA LGHVHEFQQW TGPSTVVFPG NLQGRHIRET GRRGAVLVTV EQGNTQVERL YLDVLRWEAV SVDASDCLSV ADLSRKVGQS LETLLTVDGH VPRAVRVTVT GRTPAHGLFF GRAPQLRAEV LNQIGIIGNE RLWLEKVRLA TSAADQQPGE SEPLEALEDL KQILADAAHD PDFLALLERD LKPFVGKVRS DVKEEVPLLT MARAGELTAL VEQVGPALLA RLARGE
|
| |