| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6217 |
|---|
| Symbol | |
|---|
| ID | 4453894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | - |
|---|
| Start bp | 382845 |
|---|
| End bp | 383969 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639698277 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_839842 |
|---|
| Protein GI | 116686595 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00197395 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGAGACCG CAGTGACGAC CGTCGACCAG ATTACTCAGC GGCGCCGCGG CGTCGGCCTC
ATCGCCCACG ATCCCGCGCT GTCCGCGGGC GGCTATACGC TCATCGCGCC GCAAACGGCC
GACGGCAACG TCTATCTCGT CGGCATCGAC GGCGAGGTCG TCCACCAGTG GAAGATGCCC
GTGCGCCCCG GGCGCCACGC GGTCATCCTC GCGAACGGCA ACCTCGGCTA CAACGGCAAT
CATCCGCGTT CCGAATCGCG CTACGCGCCG TGGTCGATGT GGCATGGCGG CGACTTCTAC
GAGGTCACGC CGCAGGGCGA AACGGTGTGG CGCTACGAGG ACCCCGCGCA TCACCACGAC
GCGCAGTGGC TGCCGAACGG CAACCTGCTG TACGCCGCGT GCGAACCGGT CGACGCGGCG
TTCGCGCGGC GCGTGCCGGG CGGCACCGCG CAGGGCGACG ACGAGGTGAT GTTTGCGGAC
GTGATCCGCG AAGTGAACCG TGCCGGCCAG ATCGTCTGGG AATGGCATGC GCGCGAGCAT
CTGCGACCGG AGGATTTTCC GATCGCGGCA GGCTTCGGCC GCTATCACTG GCCGCTCGTC
AACGGTCTCG CGGTCGATGC GAACGGCCGC GTGCTGATGA GCCTGCGCAC GACGTCGGGG
ATCATCGGCG TGAACCGCGC CACCGGCCGC GTCGACCTGC ACATCGGGCC CGACGTCGTG
TCGCACCAGC ATGCACCGGT GCCGCTCCCG AACGGCCACA TCCTCGCGTT CGACAACGGC
AATTTCCGTC ACGGTGCGCA CGTCGTGTTC TCGCGCGTCG TGGAAATCGA TCCGGCGACG
CAGCGCGTCG TGTGGTCGTA TGCGGACGAC GTCGTGAACC TGTTCTACAC GCCGTTCATG
GGCAACGCGC AACGCTTGCC GAACGGCAAC ACGCACATCA CCGAATCGTC GACGGGCCGG
CTGTTCGAAG TGACGCCGGC CGGCGAGGTC GTCTGGGAAT ACGTGATCCC GTGGTTCGCC
GAATACCCGG ACGAAGCGGC GCGCAAGACC GGCCCCGGCC AGTTGAACAG CGTATTCCAG
ACGTTCCGCT ACAGCGCCGC CCAGTTGCCC TGGCTACGGA CCTGA
|
|---|
| Protein sequence | METAVTTVDQ ITQRRRGVGL IAHDPALSAG GYTLIAPQTA DGNVYLVGID GEVVHQWKMP
VRPGRHAVIL ANGNLGYNGN HPRSESRYAP WSMWHGGDFY EVTPQGETVW RYEDPAHHHD
AQWLPNGNLL YAACEPVDAA FARRVPGGTA QGDDEVMFAD VIREVNRAGQ IVWEWHAREH
LRPEDFPIAA GFGRYHWPLV NGLAVDANGR VLMSLRTTSG IIGVNRATGR VDLHIGPDVV
SHQHAPVPLP NGHILAFDNG NFRHGAHVVF SRVVEIDPAT QRVVWSYADD VVNLFYTPFM
GNAQRLPNGN THITESSTGR LFEVTPAGEV VWEYVIPWFA EYPDEAARKT GPGQLNSVFQ
TFRYSAAQLP WLRT
|
|---|
| |