Gene Bcen2424_6215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6215 
Symbol 
ID4453892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp380640 
End bp381152 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content63% 
IMG OID639698275 
Productsmall integral membrane protein 
Protein accessionYP_839840 
Protein GI116686593 
COG category[S] Function unknown 
COG ID[COG5472] Predicted small integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0516112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00564006 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCATTC GTCTTTCCAA GGCAGCCATG GTGCTGGCCA TGGCCTTTTT CGCGTCGCTC 
GTCGCGTTCG GCAACATCAC CGACTACGCG ACGAATTTCG CGTTCGTGCA CCACGTGTTC
CTGATGGATA CCACCTTCCC CGCCAACGGA ATCATGTATC GCGCGATCGG CACGACGTGG
GTTCATCACG CCGGCTATAT CGGCATCATT TCGATGGAAA CGCTGACGGC CGTGCTGTGC
TGGATCGGCG GCGCCCGGCT GCTGCGCGCA CGGCGCGCCG GCGATGCGGC ATTCCGCGCG
GCCAAGGGCC ATGCGATCGC CGGCCTGACG CTCGGCTTCC TGACGTGGCA GGTCGCGTTC
ATGTCGGTCG GCGGCGAATG GTTCGGGATG TGGATGTCGA AGCAATGGAA CGGCGTGCCG
GACGCGTTCC GGTTCTTCAT CACGCTGCTG CTCGTGCTCG TCTACCTGAC GATGAATAAC
GACGGCGTCG ACGACACGCG TACCGCGCAC TGA
 
Protein sequence
MIIRLSKAAM VLAMAFFASL VAFGNITDYA TNFAFVHHVF LMDTTFPANG IMYRAIGTTW 
VHHAGYIGII SMETLTAVLC WIGGARLLRA RRAGDAAFRA AKGHAIAGLT LGFLTWQVAF
MSVGGEWFGM WMSKQWNGVP DAFRFFITLL LVLVYLTMNN DGVDDTRTAH