| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6203 |
|---|
| Symbol | |
|---|
| ID | 4454158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | + |
|---|
| Start bp | 367430 |
|---|
| End bp | 368311 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639698263 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_839828 |
|---|
| Protein GI | 116686581 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.200039 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00658058 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGACCAAC TTCAATCGAT TCGGGCATTC GTGACGGTGG CAAGGGAAGG CGGGTTTCGC
CGGGCGGCGA CGCGGTTGCG CGTGTCGACC GCGATGGCGA GCCGGCTGGT CGACGCGCTC
GAGACGCGCC TCGGCGCGCG CCTGCTTCAA CGCAGTACGA GCCATCAGTC GCTGACGGAA
ATCGGCGAGC TGTATCTCGC GCGCGTCGAG CGGATTCTCG GTGCGATCGA CGAGATCGAC
GGTCGTTTCG TCGCGATGGG CAGCAAGCCG GAAGGCGTGC TGCGCGTGGC CGCGCCGGTT
GCGTTCGGGC TCAGCCAGTT GAGCGCGCTG CTCGATCGTT TCGTGCACCG GTTTCCGGAC
GTGCGGCCGA CCGTGACGCT GACCGATGCC CACGTCGACC TGACTGCCGA GGACATCGAC
GTCGCGTTCC TGACGGACGG CATGCCGGTG TCCGGCGCAC ACGCGTTGCA TACGCTGGCC
GCGTACGAAT CCGTGCGGGT CGCGGCGCCC GATTATGTCG CCGCGCACGG CGGCGCTGCG
GCATCGGGCG ACTGGCCGGA CATCGCGGCC GTGCGGCTGG AGCTGCCGGC GGCCGATGAC
GACCCCATGG CCGGGGTGCG ATCCGGTGCG GCAACGAGCA ATGCAGGCGT CGGCCATCTC
GAGATGGCGC GGCGGCTGGC CGTGGCCGGC ATGGGTGCCG CGGTGTTGCC CGCATATCTC
GTCGAGGCCG ATCTGGCAGC CGGCACGCTG GTGCGCGTGG CCCCACTGCA CCCGCTCGCG
CCCGTCACGT TGAAGCTCGC GCATGCGCGT GCCGCGCGTT TGCCGGCCGC CGCGCGCGCG
TTCATCGAAT TCGCCGGCGC CGCATTCCGG CCCGCGCGCT AG
|
|---|
| Protein sequence | MDQLQSIRAF VTVAREGGFR RAATRLRVST AMASRLVDAL ETRLGARLLQ RSTSHQSLTE
IGELYLARVE RILGAIDEID GRFVAMGSKP EGVLRVAAPV AFGLSQLSAL LDRFVHRFPD
VRPTVTLTDA HVDLTAEDID VAFLTDGMPV SGAHALHTLA AYESVRVAAP DYVAAHGGAA
ASGDWPDIAA VRLELPAADD DPMAGVRSGA ATSNAGVGHL EMARRLAVAG MGAAVLPAYL
VEADLAAGTL VRVAPLHPLA PVTLKLAHAR AARLPAAARA FIEFAGAAFR PAR
|
|---|
| |