| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6200 |
|---|
| Symbol | |
|---|
| ID | 4454155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | + |
|---|
| Start bp | 363596 |
|---|
| End bp | 364546 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639698260 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_839825 |
|---|
| Protein GI | 116686578 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0503075 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACACGT TACAGATGAT GCGCATTTTC GTCCGGGTCG CGGAGGAGGG CAGCTTCACG
AGCGCGGCCC AGCGCCTGGA CATCACGACG GCCTACGCGT CGCGCTCGGT CGCGCAACTC
GAAACGCATC TGCGCACGCG CCTGCTCAAC CGCAGCACGC GCCGCATCGC GCTGACCGAC
GCCGGGCAAC GCTATCTCGA CCGCTGCCAG CGCATCCTCG GCTATATCGA CGAAGCGGAA
GCCGAAGCGG CCGACGCGCA GGCGAAGCCG TCCGGACGGC TGCACGTTCA CGCGACGACG
AGTTTCGGCC AGTCCTACGT GATGCCCGCG GTCGTGCGTT ACCGCGAACG CTATCCGTCG
GTCGCGGTCG AGCTGACGCT GTCGCAGCAC GTGCCCGACA TCATCGACGA AGGCTACGAC
GTGTCGCTGC AGCTGAGCAC GACGGAGCTG CCCGATTCCG GGCTGGTGTC GCAGCGGCTC
GGTGACGTGG GCAGCGTGCT GTGCGCGTCG CCTGCCTATC TGAAGGCGCG CGGCACGCCG
CGCACGGTGA GCGATCTCGC CGGGCATGCG TGCCTGCGGC TCGTCACGCC GCTGTTTCCG
CGCGACCGCT GGCACCTCGA CGGCCCGAAC GGCCGCGAAA CGGTCGAACT GCCGCTGCCG
GATTTCCAGG TGAATATCGC CGATGCGCTC GGCACCGCGC TGCGCGCGGG GCTCGGGATC
GGCTCCCTGC CGATGTCGGC GGCGCTGCCC GCGCTCGCGA GCGGCGCGCT GGTGCGTGTG
TTGCCCGATT ACCGGCTGCA GAAGCTGACG GTCTACACGT TGTATGCGTC GCGTCAGTAT
CTCGATGCGA AGATCCGCAC GTTCGTCGAT TTCCTGCGGG AATGCGTGCC CGAGATGCTG
GCTGCCGACG AGGCTGCGTT GAACGCTTGT TGCGCGTCCC GTCAATCCTG A
|
|---|
| Protein sequence | MDTLQMMRIF VRVAEEGSFT SAAQRLDITT AYASRSVAQL ETHLRTRLLN RSTRRIALTD
AGQRYLDRCQ RILGYIDEAE AEAADAQAKP SGRLHVHATT SFGQSYVMPA VVRYRERYPS
VAVELTLSQH VPDIIDEGYD VSLQLSTTEL PDSGLVSQRL GDVGSVLCAS PAYLKARGTP
RTVSDLAGHA CLRLVTPLFP RDRWHLDGPN GRETVELPLP DFQVNIADAL GTALRAGLGI
GSLPMSAALP ALASGALVRV LPDYRLQKLT VYTLYASRQY LDAKIRTFVD FLRECVPEML
AADEAALNAC CASRQS
|
|---|
| |