| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6198 |
|---|
| Symbol | |
|---|
| ID | 4454153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | - |
|---|
| Start bp | 360966 |
|---|
| End bp | 361856 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639698258 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_839823 |
|---|
| Protein GI | 116686576 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0533844 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGAC GACTCCCTCC ATTGAATTCG CTGCGCGCGT TCGAAGCCGC CGCGCGGCTC
GGCAGCTTCA CGCTGGCCGC GGACGAGCTG TGCGTGACGC ACGGCGCGAT CAGCCGGCAT
GTGCAGCAAC TGGAAGCATG GCTTGGCCGG CCGCTGTTCG AACGCCACAA CCGGCGCGTC
GAACTGACCG CGGCCGGCCG CGCGTACCTC GCCGAGGTCG GCGCTTCGTT CGACCGGATC
GCGCTCGCCA CCGCACAGCA TTTCGGCCAC GCACAGCAGC GCGTGCTGCG CGTCAGTGCA
CCCGCGACGT TCTCGCTGCG CTGGCTCGTC CCGAAGCTGT CGTCGTTCCA GGTCGCGCAT
CCGGCCATCG AGGTGCGGCT GTCGACGTCG AACGAGCCGA TCGACAAGTT GCGCGACAAG
GTCGACCTGA TCGTTCGCGG CGGCCCGCAG GCCATCGACG GGTACGTCGC GGAGGAATTC
CTGTCCGAAG TCCGGCTGCC GGTGTGTGCG CCGAAGTTGC TGGAGGGCCG GTCGCTGGAT
ACACCCGCCG ATCTCGCCGG CTTCACGCTG CTGCACGCGG CAACCTATCC GGGCATGTGG
CCGGAGTGGC TCGCGGCGGC CGGGCATCCG AACCTCGTGC CGCGGCACTC GCTCACCCTC
GAGCATTTCT ACCTGACGCT GCAAGGCGCG CTCGACGGGC TCGGCGTCGC GATGGGGCCG
ATCGCGCTCG TCGCCGACGA CATCGCCGAA GGCCGGCTCG TGCAGCCGTT CAGCGAACCG
GCGCTGCCGC CATGGCGCTA CTTCACGTAT GTGGCGTCCG CACGGGCGGA CGATGACGCC
GTACGCGCGT TCAAGGACTG GCTGAAGGCA ACGGGAAGGG CGACTGTGTA G
|
|---|
| Protein sequence | MARRLPPLNS LRAFEAAARL GSFTLAADEL CVTHGAISRH VQQLEAWLGR PLFERHNRRV
ELTAAGRAYL AEVGASFDRI ALATAQHFGH AQQRVLRVSA PATFSLRWLV PKLSSFQVAH
PAIEVRLSTS NEPIDKLRDK VDLIVRGGPQ AIDGYVAEEF LSEVRLPVCA PKLLEGRSLD
TPADLAGFTL LHAATYPGMW PEWLAAAGHP NLVPRHSLTL EHFYLTLQGA LDGLGVAMGP
IALVADDIAE GRLVQPFSEP ALPPWRYFTY VASARADDDA VRAFKDWLKA TGRATV
|
|---|
| |