Gene Bcen2424_6190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6190 
Symbol 
ID4453919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp352108 
End bp353124 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content62% 
IMG OID639698250 
ProductAraC family transcriptional regulator 
Protein accessionYP_839815 
Protein GI116686568 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.636005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.381887 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCCGG CATCCCTCCG ATACATATCC GGCCAACGCA ATGATGACGT CGCCATCGCG 
GCATTCGACC AGGCGAGCGA CCGTTCGACC GGTCGCAGCC GCGAGAACGA GCTACGACAG
TCGCTCGCGG AGCGCGTCGC GAGATGGACC GAAGGAGTCG ATCATCTCGA CACGGCCATT
CCCAACCTGA GCTTTCATCG AAGGGAAGCG CCGACGCAGC CGATGGAATG CATGGTCGAG
CCGAGCTTCG GTCTCGTCGT TCAAGGCGCG AAGCGGGTCA TGCAGAGCGG AGACGCCTAT
ATCTATGACA CGGACCGCTT TCTGATCACG TCACTCGACC TGCCCGGTTC GACGCAGATC
ATCGAAGCCA GCCCCGACAA ACCGTTTCTC GGGCTCGGCC TCAAGCTCGA TTTTCGCGTC
ATGGCCGAAT TGATGATGCA AGTCGCGCCG GATCACGACG ATGCGCCGGC CGGCCGCGGG
CTCGTCGTGG GCGACATGAC CGAGCCTCTG TACGACGCGC TGAACCGGTT GCTCGCGCTG
CTGGACGACC CGAACGCGAT TGCCGTTCTC GCACCGTATG TCGAGCGGGA AATTTACTAT
CGGCTGCTGA CGAGCGACCA GGGCGCCCGC CTGCGTCAGA TTGCGTCCGC CGGCAGTCAG
TGCAACCGCG TGTCACGCGC GATCCGGTGG TTGCGCGCTC ACTACGACGA GTCGTTGCGT
GTCGATGATC TCGCGGCGCA GGTTCAGATG AGCAGTTCGA CCTTCCATCA CCACTTCCGT
CAACTCACCG GCATGAGTCC TCTCCAGTAC CAGAAATGGA TACGCCTCAA CGAGGCACGT
CGGCTGATGC TGGCGGAGCG GCTCGACGCC GCGTCGGCAG CATTCAGGGT CGGGTATGCG
AGCCCGACCC AGTTCAACCG GGAATATAGC CGGCTGTTCG GTAACTCTCC GCGAAGGGAT
ATCGATAGCC TGCGAGGTGG CGGGGATGTC GCCTTGTCGA TCGTCGCGAG TTATTGA
 
Protein sequence
MHPASLRYIS GQRNDDVAIA AFDQASDRST GRSRENELRQ SLAERVARWT EGVDHLDTAI 
PNLSFHRREA PTQPMECMVE PSFGLVVQGA KRVMQSGDAY IYDTDRFLIT SLDLPGSTQI
IEASPDKPFL GLGLKLDFRV MAELMMQVAP DHDDAPAGRG LVVGDMTEPL YDALNRLLAL
LDDPNAIAVL APYVEREIYY RLLTSDQGAR LRQIASAGSQ CNRVSRAIRW LRAHYDESLR
VDDLAAQVQM SSSTFHHHFR QLTGMSPLQY QKWIRLNEAR RLMLAERLDA ASAAFRVGYA
SPTQFNREYS RLFGNSPRRD IDSLRGGGDV ALSIVASY