Gene Bcen2424_6169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6169 
SymboleutB 
ID4454532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp330464 
End bp331435 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content73% 
IMG OID639698229 
Productthreonine dehydratase 
Protein accessionYP_839794 
Protein GI116686547 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1171] Threonine dehydratase 
TIGRFAM ID[TIGR02991] ectoine utilization protein EutB 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0794807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTCC TGTCGCTGTC CGACGTTTAC CGCGCGCGCC GTCGCCTCGC CGGGCGCGCC 
GACGGCACGC CGCTCGTCGC GTCCGCCGCG CTGTCCGCGC GCGCGGGCGC CCCCGTCTAC
CTGAAACTCG AGACGCTGCA GCCGACCGGC AGCTTCAAGC TGCGCGGCGC GACCAATGCG
CTCGCGGAAC TCGCGGCCCA ACGCGTGACG CGCGTGGTCA CCGCGTCGAC CGGCAACCAC
GGCCGCGCGG TCGCGCATGC GGCACGCGCG CTCGGCATCG ACGCGGCCGT CTGCATGTCG
TCGCTGGTGC CGGCCAACAA GGTCGATGCG GTCGCGGCGC TCGGCGCGCG CGTGGTGATC
GTCGGCGAGA GCCAGGACGA CGCGCAGGCC GAGGCACGGC GCCTGGTGCG CGACGAAGGC
TATGCGTACG TACCGCCGTT CGACGATCCG CGCATCATCG CGGGCCAGGC GACGATCGGC
GTCGAGATCC TAGAGGCGCT GCCCGATACG GCGACGCTCG TCGTGCCGCT GTCGGGCGGC
GGCCTGTTCA GCGGCGTCGC GTTTGCCGCG AAGGCGATCC GGCCGCCGAT CGAGGTGATC
GGCGTATCGA TGGCGCGCGG CGCCGCGATG CACGCGAGCC TCGCGGCCGG CCGCCCGGTC
GACGTCACCG AGCAGCCGAC GCTGGCCGAT TCGCTCGGCG GCGGCATCGG TCTGGACAAC
CGCTACACGT TCGACATGAC GCGCGCGCTG GCCGACGACG TCGTGCTGCT CGACGAGCTG
TCGATCGCGC GCGGCATCGC GCATGCGTAT CGGGAAGAGC GGCTCGTCGT CGAAGGCGCC
GGCGCGGTCG GCCTCGCCGC GTTGCTGGAC GAGCGGATCG TGCGCCGCGA TCGCGGCGGC
CCGATCGTGG TCGTCGTGAG CGGCGCGAAC ATCGACATGG CCGCGCATCG CCGGCTCGTT
TCGGAGAACT GA
 
Protein sequence
MSFLSLSDVY RARRRLAGRA DGTPLVASAA LSARAGAPVY LKLETLQPTG SFKLRGATNA 
LAELAAQRVT RVVTASTGNH GRAVAHAARA LGIDAAVCMS SLVPANKVDA VAALGARVVI
VGESQDDAQA EARRLVRDEG YAYVPPFDDP RIIAGQATIG VEILEALPDT ATLVVPLSGG
GLFSGVAFAA KAIRPPIEVI GVSMARGAAM HASLAAGRPV DVTEQPTLAD SLGGGIGLDN
RYTFDMTRAL ADDVVLLDEL SIARGIAHAY REERLVVEGA GAVGLAALLD ERIVRRDRGG
PIVVVVSGAN IDMAAHRRLV SEN