| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6156 |
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| Symbol | |
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| ID | 4454431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008544 |
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| Strand | + |
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| Start bp | 314336 |
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| End bp | 315463 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639698216 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_839781 |
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| Protein GI | 116686534 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.164312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.688082 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCCA TTTCCGCATC GCCGCGCCCG CTCAATCTTC GTGTCGTTAC CGCTTCCCGC
GACCCCGCAG GCCTTCAAGC CGCGGCGCCC GTGCGCACGC TGCCCGAACG CCACGCGCAG
GCCCGCGCCC AGGCGCAGGT GTTCGCCGAT CCGCGTTCGC TCGCGCTGCT CGAACAGGTT
CGCCGCGTCG CGCCGAGCGA CGCGAACGTG CTGATCGTCG GCGAAACGGG CACCGGCAAG
GAATTGATCG CGCGCCACGT GCATGAGCTC GGCGCCCGTC GCGACGGGCC GTTCGTCGCG
GTGAACTGCG GCGCGTTCTC CGAAACGCTC GTCGACAGCG AACTGTTCGG CCACGAGAAA
GGCGCGTTTA CCGGCGCATT CAGCGCGAAG CCCGGCTGGT TCGAAGCCGC GCACGGCGGC
ACGCTGTTTC TCGATGAAAT CGGCGACCTG CCGCTCGCGA TGCAGGTCAA GCTGCTGCGC
GTGCTGCAGG AGCGCGAGGT CGTGCGGCTC GGTTCGCGCA CCGGGATTCC GGTCGACGTA
CGGGTGGTCG CGGCGACCAA CGTCGACTTG CAGCAGGCGG TCGCGGCCGG GAAGTTTCGT
GGCGACCTGT TCTACCGGCT CAATGTCGTG CAGCTCGCGG TCCCGCCGTT GCGCGACCGC
CCGGGCGACA TCCTGCCGCT CGCGCGCCAC TTCTTCGACA TTTACCGCGA CCGGCTCGGC
GGCGGCCCGC GCCGCATCGA TCCACGCGCC GAGCGACGGC TCCAGGCGCA CGGCTGGCCC
GGCAATATCC GCGAACTGGA GAACGTGATC CATCATGCGC TGCTCGTGAG CCGTCACGAC
GTGCTGCAGG ACACCGACCT GCACATCGCG CCGCCGTGTG TGCCGGCCGT GGCCGCGCAG
GCAACCGATT CGTCCGCCGA TGCACAGGCG GCGCTCGAGC ATGCGCTGCG CGACCTGTTC
GACGACGGGC ACGGCAACCT GTTCGAACAC ATCGAGGACA CCGTGATGCG TGTCGCGTTC
GAATTCAGCC ACCGCAACCA GATCCGCACC GCGCAGTTGC TCGGCATCAG CCGCAACGTG
CTGCGCGCCC GGCTGATCCG CGCGAAGGCA ATCACCGCGC TGAAATAG
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| Protein sequence | MTSISASPRP LNLRVVTASR DPAGLQAAAP VRTLPERHAQ ARAQAQVFAD PRSLALLEQV
RRVAPSDANV LIVGETGTGK ELIARHVHEL GARRDGPFVA VNCGAFSETL VDSELFGHEK
GAFTGAFSAK PGWFEAAHGG TLFLDEIGDL PLAMQVKLLR VLQEREVVRL GSRTGIPVDV
RVVAATNVDL QQAVAAGKFR GDLFYRLNVV QLAVPPLRDR PGDILPLARH FFDIYRDRLG
GGPRRIDPRA ERRLQAHGWP GNIRELENVI HHALLVSRHD VLQDTDLHIA PPCVPAVAAQ
ATDSSADAQA ALEHALRDLF DDGHGNLFEH IEDTVMRVAF EFSHRNQIRT AQLLGISRNV
LRARLIRAKA ITALK
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