| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6150 |
|---|
| Symbol | |
|---|
| ID | 4454425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | - |
|---|
| Start bp | 306393 |
|---|
| End bp | 309449 |
|---|
| Gene Length | 3057 bp |
|---|
| Protein Length | 1018 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639698210 |
|---|
| Product | FAD linked oxidase domain-containing protein |
|---|
| Protein accession | YP_839775 |
|---|
| Protein GI | 116686528 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0247] Fe-S oxidoreductase
[COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.577395 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATCG CCCCGTTGCC CCGTCCCGCC AGCCCGTCCG CGAACGTTTA CCGCGATTTT
CTCGCCGCGC TGCAGGTGGC CGGCTTCGCC GGGGAAATCC GTGCGGACCA CGCGAACCGG
ACCGTGCAGG CCACCGACAA CTCGATCTAC CAGCGCCTGC CGCAGGCGGT GATCTGCCCC
GCGCATGCGG ATGACGTGCA GCTGCTGGCC CGACTGCTGG CCGAACCCGC GCACCGCGAC
GTCGCGGTGG CCGCGCGCGG CGGCGGCACC GGCACCAACG GGCAGTCGCT GACCGACGGC
ATCGTCGTCG ACCTGTCGCG CAACATGAAC CGGATCCTCG AAATCAACGC GCAAGCGCGC
TGGGTGCGCG TCGAGGCGGG CGTCGTCAAG GATCAGCTCA ATGCGGCGTT GAAGCCGCAC
GGGCTGTTCT TCGCGCCGGA GCTGTCGACG TCGAACCGTG CGACCGTCGG CGGGATGATC
AACACCGACG CGAGCGGGCA GGGCAGCTGC ACGTACGGCA AGACGCGCGA TCACGTGCTC
GAACTCGATT TCGTGCTGAT GGGCGGCGAG CGGCTGCACA GCGACGCGCT CGACGATGAA
GAACTGGCGC GCCGCTGCGC GCGGCAGGAC CGCGTCGGCA AGGTGTATCG CACCGCGCGA
CGCATCAGCG ACGACAAGGC GGCGCTGATC GACGCGAAAT TTCCGAAGCT CAATCGCTGC
CTGACCGGCT ATGACCTCGC GCACCTGCGC GAACCCGACG GCCGCTTCAA CCTGAACAGC
GTGTTGTGCG GCGCGGAAGG GTCGCTCGGC TTCGTCGTCG AGGCGAAGCT CAACGTGCTG
CCGATTCCGA AATATTCGGT GCTGGTCAAC GTGCGCTACG CGGGCTTCAT GGACGCGCTG
CGCGATGCGC GCGCGCTGCT CGAACTCGCG CCGCTGTCGA TCGAGACGGT CGACTCGAAG
GTACTGATGC TGGCGATGAA GGACTTCGTG TGGAGCAGCG TGGCCGAGTA TTTCCCGCAG
GACGACGCGC GTCCGACGCT CGGCATCAAC CTGATCGAAT TCAGCGGCGA CGACGAACGC
GACGTCGATG CACGCGTGCG TGCGTTCGTC GAGCATCTGC GCACCGATAC GAGCGTCGAG
CGTCTCGGCC ATACGCTCGC GGCCGGCGAC GACGCGGTGA AGCGCGTGTA TGCGATGCGC
AAGCGCGCGG TCGGCCTGCT CGGCAACGTG CAGGGCGAGG CGCGGCCGCA GCCGTTCGTC
GAGGACACCG CGGTGCCGCC CGAGAACCTC GCCGCGTACA TCGCCGAATT CCGCGCGCTG
CTCGACGGCC ACGGGCTGCA GTACGGGATG TTCGGCCACG TCGATGCCGG CGTGCTGCAC
GTGCGCCCGG CGCTCGACAT GAAGGACCCG AAGCAGGCCG CGCTGGTGCG GCCCCTGTCG
GATGCGGTGG CCGAGCTCAC GCAGCGCCAT GGTGGCCTGT TATGGGGCGA GCACGGCAAG
GGCGTGCGCT CCGAATATGC GCCGGCGTTT TTCGGCGAGC TGTATCCGTC GCTGCAGCAG
CTGAAGGCCG CGTTCGATCC GCACAACCAG TTCAACCCGG GCAAGATCGC GACGCCGCCG
GACCCTACGC TGCGGCTGCT GAAGATCGAC GAGGTGCCGA CGCGCGGCGA CCACGACCGG
CAGATCGACG AGCGCGTGTG GCAAAGCTAC GGCACCGCGA TGCATTGCAA CGGCAACGGC
GCGTGCTACA ACTTCGATCC GGACGACGCG ATGTGTCCGT CGTGGAAGGC GACGCGCGAA
CGCGTGCAGT CGCCGAAGGG GCGCGCGTCG CTGATGCGCG AATGGTTGCG TCTGCAAGGG
CAGGCCGGCG TCGACGTCGT CGCGGCGGCG CGCACGCGGC AGCCGTTCCT GCGCGGGCTG
GCCGAGCGCT GGCGCAACAG CCGCAACGCC CGCAACGCCC GCGATGGCGA CGCGGATTTC
TCGCACGAGG TGTACGACGC GATGGCCGGG TGCCTCGCAT GCAAGTCGTG CGCGGGGCAG
TGCCCGGTCA AGGTCAACGT GCCCGAGTTT CGCTCGCGCT TTCTCGAGCT GTATCACCAG
CGTTACCTGC GGCCGTTGCG CGACTACCTG ATCGGCTCGC TCGAATTCAC GATGCCGTGG
ATGGCGCGCG TGCCCGCTGT GTACAACGGG CTGATGGGCG CCGGCTGGGT GAGGACGCTG
CTCGAGCGCC AGGTCGGCAT GGTCGACAGC CCGCTGCTGA GCCGCTTCGA TCTCGCGGCC
GTGATCCGCG CATGGCGCGT GAAGCCGGCC GACCCGCATG CGCTCGCCGC GCTGAGCGAC
GCGCAGCGCG CGCGCAGCGT CGTCATCGTG CAGGACACGT TCACGCGCTA TTTCGATACC
GAGCAACTGG CGACGCTGAT CGAGCTGGCG GCGCGCCTGG GCTTTCAGGT GTGGCTCGCG
CCGCTCGCGC CGAACGGCAA GGCGCTACAC GTGCAGGGCT TTCTTCACGC ATTCGAAAAG
GCGGCGATCC GCAACGCGAC GCAACTGGCC GCACTGGCGC GCTCGGGTGT CGCGCTGGTC
GGCCTCGATC CGGCGATGAC GCTCACGTAT CGGCAGGAAT ACCTGAAGGT GACCGGGCTC
GCCGACGTGC CGAAGGTCGC GCTGCCGCAG GAATGGTTGC TGGATGCGCT GCCGCAAGCC
GGTGCGGGCG GGGCGACGGT TTCATACCGG TTGCTGCCGC ACTGCACCGA GAAGACCAAT
GCGCCGGACA GCGGCAAGCA GTGGGCGCAG GTGTTCGCAC GTCGCGGGCT GCGCTTGCAG
GTTCAGGCGA CCGGGTGCTG CGGGATGTCG GGCACGTACG GGCACGAGGC GCGCAATCTC
GCGACGTCGA AGACGATCTA TGCGCAGTCG TGGGCCGCGC ACGTCGACGG GGTGCAGCAG
GAGGGCGAGG CGCTGGCGAC CGGGTATTCG TGTCGCAGCC AGGTGAAACG CCTGTCGTCG
AAGCAGGTGC GCCATCCGCT GCAGGCGCTG CTCGATCATG TGCGGGCGGT GGGGTGA
|
|---|
| Protein sequence | MSIAPLPRPA SPSANVYRDF LAALQVAGFA GEIRADHANR TVQATDNSIY QRLPQAVICP
AHADDVQLLA RLLAEPAHRD VAVAARGGGT GTNGQSLTDG IVVDLSRNMN RILEINAQAR
WVRVEAGVVK DQLNAALKPH GLFFAPELST SNRATVGGMI NTDASGQGSC TYGKTRDHVL
ELDFVLMGGE RLHSDALDDE ELARRCARQD RVGKVYRTAR RISDDKAALI DAKFPKLNRC
LTGYDLAHLR EPDGRFNLNS VLCGAEGSLG FVVEAKLNVL PIPKYSVLVN VRYAGFMDAL
RDARALLELA PLSIETVDSK VLMLAMKDFV WSSVAEYFPQ DDARPTLGIN LIEFSGDDER
DVDARVRAFV EHLRTDTSVE RLGHTLAAGD DAVKRVYAMR KRAVGLLGNV QGEARPQPFV
EDTAVPPENL AAYIAEFRAL LDGHGLQYGM FGHVDAGVLH VRPALDMKDP KQAALVRPLS
DAVAELTQRH GGLLWGEHGK GVRSEYAPAF FGELYPSLQQ LKAAFDPHNQ FNPGKIATPP
DPTLRLLKID EVPTRGDHDR QIDERVWQSY GTAMHCNGNG ACYNFDPDDA MCPSWKATRE
RVQSPKGRAS LMREWLRLQG QAGVDVVAAA RTRQPFLRGL AERWRNSRNA RNARDGDADF
SHEVYDAMAG CLACKSCAGQ CPVKVNVPEF RSRFLELYHQ RYLRPLRDYL IGSLEFTMPW
MARVPAVYNG LMGAGWVRTL LERQVGMVDS PLLSRFDLAA VIRAWRVKPA DPHALAALSD
AQRARSVVIV QDTFTRYFDT EQLATLIELA ARLGFQVWLA PLAPNGKALH VQGFLHAFEK
AAIRNATQLA ALARSGVALV GLDPAMTLTY RQEYLKVTGL ADVPKVALPQ EWLLDALPQA
GAGGATVSYR LLPHCTEKTN APDSGKQWAQ VFARRGLRLQ VQATGCCGMS GTYGHEARNL
ATSKTIYAQS WAAHVDGVQQ EGEALATGYS CRSQVKRLSS KQVRHPLQAL LDHVRAVG
|
|---|
| |