| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6141 |
|---|
| Symbol | |
|---|
| ID | 4454522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | + |
|---|
| Start bp | 297516 |
|---|
| End bp | 298688 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639698201 |
|---|
| Product | porin |
|---|
| Protein accession | YP_839766 |
|---|
| Protein GI | 116686519 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.593112 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGA TTCGTTCATT CGCGCTGCTC GCCCTGCCGG CCGCGCTCGT CGCCGCCGGC
GCGCACGCAC AAAGCAGCGT CACGCTGTAC GGCATCGCCG ACGCGGGCAT CGCATACGTC
CACAACGCGC AGAACGCGAA CGGCAGCAAC GCGTCGAGCC TCGTGAAGTT CAGCAGCGGC
AACCTGTCGG GCAGCCGCTG GGGGCTGCGC GGCATCGAGG ATCTCGGCAG CGGCCTGTCC
GCGCTGTTCC AGCTCGAGAA CGGCTTCAAC ATCGGCACCG GCGCGCTCGG CCAGGGCGGG
CGCGAATTCG GCCGCAAGGC CGTCGTCGGC CTCGGGAGCA GCACCTACGG CACCGTGACG
CTCGGCCGCC AGTACGATCC GATCGTCGAT CTCGTGCAGG GCCTCACGCA GGACAACTAC
TTCGGCGGCG TGTTCGCGAC GCCGGGGGAT CTCGACAACT ACGACAACAG CCTGCGCGTC
AGCAACTCGG TGAAATACAC GAGCCCGCTG ATCTCCGGCT TCCAGTTCGA GGCGCTGTAC
GGCTTCGGCG GCGTCGCGGG CGCGACCGGC AGCGGCCGCA CGTACAGCTT CGGCGCGAGC
TATGCGAACG GCCCGCTGTC GCTCGGCGCC GGCTACTTCT ACGCGAACGG CGGCACGACG
GTCGCGAACG GCGTGCGCAC GTGGTCGAGC AGCGCGGACA CGCTGTTCAA CACCGTGATC
AACCAGGGCT TCTCCAGCGC GAAGTCGATC CAGATCGTGC GCGTGGCCGG CCAGTACGTG
GCCGGACCGG CCACCTTCGG CCTCGCGTAT TCGAACACGC AGTACGGCGC GGACACGCTG
TCGGCATTCA GCCAGAACGC GAAGTTCAAC AACGGCTCGG CATTCTTCAA CTGGCAGTTC
TCGCCGGCAC TGCGCGCGGG CGTCGGCTAC AACTACACGT CGCTGACGGG CCCGGCTTCC
GCGCACTACA ACCAGGTCAA CCTCGGCGCG GATTACGCGC TGTCGAAGCG CACCGACCTG
TATGCGCTGT TCGGCTATCA GAAGGCGAGC GGCAACACGC TCGACGCGAG CGGCGCGACC
GTGAAAGCGG CCGCGTCGGT CGGCTCGTAC GGCGTGAATT CCGGCACCGA TACGCAGGAA
CTCGCGATCG TCGGCATCCG CCACAAGTTC TGA
|
|---|
| Protein sequence | MKQIRSFALL ALPAALVAAG AHAQSSVTLY GIADAGIAYV HNAQNANGSN ASSLVKFSSG
NLSGSRWGLR GIEDLGSGLS ALFQLENGFN IGTGALGQGG REFGRKAVVG LGSSTYGTVT
LGRQYDPIVD LVQGLTQDNY FGGVFATPGD LDNYDNSLRV SNSVKYTSPL ISGFQFEALY
GFGGVAGATG SGRTYSFGAS YANGPLSLGA GYFYANGGTT VANGVRTWSS SADTLFNTVI
NQGFSSAKSI QIVRVAGQYV AGPATFGLAY SNTQYGADTL SAFSQNAKFN NGSAFFNWQF
SPALRAGVGY NYTSLTGPAS AHYNQVNLGA DYALSKRTDL YALFGYQKAS GNTLDASGAT
VKAAASVGSY GVNSGTDTQE LAIVGIRHKF
|
|---|
| |