Gene Bcen2424_6133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6133 
Symbol 
ID4454514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp289840 
End bp290574 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content70% 
IMG OID639698193 
ProductLrgB family protein 
Protein accessionYP_839758 
Protein GI116686511 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1346] Putative effector of murein hydrolase 
TIGRFAM ID[TIGR00659] conserved hypothetical protein TIGR00659 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.7753 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.649123 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGT TCCCGAAGCT CGGCGCGATC TGGGTCTATC TCGCCGCGAG CCCGCTGCTG 
GGCCTGACCA TCACGCTGGT CGCGTATCTG TTCGCGCAGG CCGTCTATGC GCGGGCGCGT
TTCAATCCGC TGGCGAATCC GGTGCTGATC GCGGTCGCGG TGATCGTCGT GCTGCTGACG
CTCACGCATA CGCCGTATCC CACGTATTTC GAAGGCGCGC AGTTCGTCCA CTTCCTGCTC
GGCCCGGCGA CCGTCGCGCT CGCGCTGCCG CTGTACCGCC AGTGGTCGAA GCTGCGGCGC
ACCGCGTTGC CGCTGCTCGT CGGCCTGCTC GCGGGTTCGC TGACCGCGAT CGTGTCGGCG
GTCGGTATCG CCGCGCTGTT CGGGGCGTCC CATCAGACAA TCGCGTCGCT CGCCCCGAAA
TCGGCGACGA CGCCGATCGC GATGGCCGTC GCCGCGGAGA TCGGCGGCAT TCCGTCGCTC
ACGGCCGTGC TCGTGATCTC GACCGGGATT TTCGGCGCGG TGTGCGCGCG CGCGATCCTC
AATCTGCTGC GGATCGACGA GCCGGCCGTG CGCGGCTTCG CGCTCGGCGT CGCGTCGCAC
GGGATCGGCA CCGCGCGCGC GTTCCAGGTC AGCGAGGAAG CCGGCGCGTT CGCCGGGCTC
GGGATGGGGC TGAACGGCGT GCTGACGGCG TTCGTCGTGC CGATCCTGCT GCCGGTGCTG
TCGCGCTGGA TCTGA
 
Protein sequence
MTAFPKLGAI WVYLAASPLL GLTITLVAYL FAQAVYARAR FNPLANPVLI AVAVIVVLLT 
LTHTPYPTYF EGAQFVHFLL GPATVALALP LYRQWSKLRR TALPLLVGLL AGSLTAIVSA
VGIAALFGAS HQTIASLAPK SATTPIAMAV AAEIGGIPSL TAVLVISTGI FGAVCARAIL
NLLRIDEPAV RGFALGVASH GIGTARAFQV SEEAGAFAGL GMGLNGVLTA FVVPILLPVL
SRWI