Gene Bcen2424_6130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6130 
Symbol 
ID4454511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp287810 
End bp288535 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content65% 
IMG OID639698190 
Productpirin domain-containing protein 
Protein accessionYP_839755 
Protein GI116686508 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.956579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.629081 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATA TCCGTGCAGC AAACCAACGT GGCCGTGCGG AGCATGGCTG GCTCAGCTCC 
CGTCATACGT TTTCGTTCGC GAATTACTAC GATCCGAAGC AAGTCGGCTT CTCCGACCTG
CTCGTGATCA ACGACGACCG CGTCGCCCCG GGCCGCGGCT TCGGCACGCA CCCGCACCGC
GACATGGAAA TCCTGTCGTA CGTGCTCGAC GGCGCGCTCG AACACAAGGA CTCGATGGGC
ACCGGTTCGG TGATCGTGCC GGGCGACGTG CAGTTGATGA GCGCGGGCAC GGGCGTGCGC
CACAGCGAGT TCAACCACTC GCAGGACACG CCGGTCCACT TCCTGCAGAT CTGGGTCGGG
CCGGCCGAAA AGGGTGCCGA GCCGCGTTAT CAGCAGACCA ATGTCGCGGC CGACGACAAG
CGCGGCAAGC TCGCCCTCGT CGTGTCGCCG AACGGCGATG CCGGTTCGCT GAAGATCCGG
CAGGACACCC GGATTTACGC GGGCCTGTTC GACGGCGACG AAAGCACTAC GCTGGAACTC
GATCCGAGCC GTTTTGCTTA CGTCCACGTG GCACGCGGCA GCGTGACGGT CAACGGCGTG
ACGCTCGGCG AAGGCGACGG CGCGCGCATC CGCGGCGAAC AGGCGCTGAC GATCGCCGAC
GGCAAGGATG CCGAAGTGCT GGTGTTCGAC CTGCGTCCGG TCGAAGTGAC GGCCGAATGG
GCGTGA
 
Protein sequence
MIDIRAANQR GRAEHGWLSS RHTFSFANYY DPKQVGFSDL LVINDDRVAP GRGFGTHPHR 
DMEILSYVLD GALEHKDSMG TGSVIVPGDV QLMSAGTGVR HSEFNHSQDT PVHFLQIWVG
PAEKGAEPRY QQTNVAADDK RGKLALVVSP NGDAGSLKIR QDTRIYAGLF DGDESTTLEL
DPSRFAYVHV ARGSVTVNGV TLGEGDGARI RGEQALTIAD GKDAEVLVFD LRPVEVTAEW
A