Gene Bcen2424_6115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6115 
Symbol 
ID4454443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp268928 
End bp270037 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content62% 
IMG OID639698175 
Productextracellular solute-binding protein 
Protein accessionYP_839740 
Protein GI116686493 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.602476 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGAAT TCAAAATTTG TCTAGTCATC ATTGCGATTC GGCCGCCCGA ATCGCACCAA 
ACGTGTGCCG CCATTCCCCG TAACGAGGCA CGCCAGACCC TTGAAATTAG GGGATTTCCC
GCGTTTCCGC CGTTTTTATT GATCACCCCT TGTCTCGCTG TTTTTCTTCT TGCATGCTTG
TATAGACAAA TTCCTGAGGC GGCTTGCTGC ACCGAAGGGA TGGCGAACTT CAACGCAAGG
AGAAATCTCG TGAACGGCAA GCGCATCAAG TGGGCAATCA GGACGATCGG CGTCATCGCG
GCTGCGGCGG CAACGCTCGC GGCGCCGGTG CAGGCAAAGG AATGGAAGAC GGTGACGGTC
GCGCTCGAAG GCGGCTACGC GCCGTGGAAC CTCACGCTGC CGGGCGGCAA GCTGGGCGGT
TTCGAACCGG AGCTGCTCGC CAACGTGTGC GAGCGCATCA AGGTGCAGTG CAACATGGTC
GCGCAGGACT GGGACGGGAT GATTCCGGGC CTGCAGGCCG GCAAGTTCGA TGTCCTGATG
GATGCCATTT CGATCACGCC GGAGCGCGAA AAGATCCTGC TGTTCTCGCG TCCGTATGCG
GCGACGCCGG CGACGTTCGC CGTCACCGAT ACGAAGATCC TGCCGAAGGC CGCGCCCGGC
GCACCGATCG TCAAGCTCAC AGGTGACGCC AACGCGGACA AGCCTACCGT CGACACGCTG
CGCAAGCAGC TGAAGGGCAA GACGATCGGT ATCCAGTCGG GCACCGTCTA CACGAAATTC
ATCAACGACA GCTTCAAGGA CATCGCGTCG ATTCGCGTGT ACAAGACGTC GCCCGAACGC
GATCTCGATC TGGTCGCCGG GCGCATCGAT GCATCGTTCG ACGACGTCAC GTACTACGCG
GCGAACAACG CGAAGAAGGA CAACGCGTCG ATCGTGCTCG CGGGGCCGAA GCTCGGCGGC
CCGATCTGGG GGCCGGGCGA GGGGCTCGCG TTCCGCAAGC AGGATGCCGA CCTGAAGACG
AAGTTCGATA CGGCGATCGC CGCGGCGCTC GCGGACGGCA CCGTGAAGAA GCTCGCCGAC
AAGTGGTTCA AGACCGACGT CACGCCGTAA
 
Protein sequence
MVEFKICLVI IAIRPPESHQ TCAAIPRNEA RQTLEIRGFP AFPPFLLITP CLAVFLLACL 
YRQIPEAACC TEGMANFNAR RNLVNGKRIK WAIRTIGVIA AAAATLAAPV QAKEWKTVTV
ALEGGYAPWN LTLPGGKLGG FEPELLANVC ERIKVQCNMV AQDWDGMIPG LQAGKFDVLM
DAISITPERE KILLFSRPYA ATPATFAVTD TKILPKAAPG APIVKLTGDA NADKPTVDTL
RKQLKGKTIG IQSGTVYTKF INDSFKDIAS IRVYKTSPER DLDLVAGRID ASFDDVTYYA
ANNAKKDNAS IVLAGPKLGG PIWGPGEGLA FRKQDADLKT KFDTAIAAAL ADGTVKKLAD
KWFKTDVTP