| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6113 |
|---|
| Symbol | |
|---|
| ID | 4454441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | - |
|---|
| Start bp | 267346 |
|---|
| End bp | 268092 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639698173 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_839738 |
|---|
| Protein GI | 116686491 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.925457 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATCG ATTTCGCTTT TCTCCTCGAT ACGCTGCGCC AACTGCTCGC GGCCGTGCCG
ACCACGCTCG GCCTGTTCTT CGCATCGCTC GTGCTCGGCG GCCTGCTGTC GCTCGTGATC
GTCACGATGC GCGTGTCGCC GCGCTGGCTG CCGAACCGCT TCGCGCGGGC CTACATCCTC
GTGTTTCGCG GCTCGCCGCT GCTGATCCAG ATGTTTCTCG TGTATTACGG GCTCGGCCAG
TTCGGCGTGA TCCGCGAGAG CTTCATGTGG CCGCTGCTGC GCGAGCCGTA CGTCTGCGCG
GTGCTGTCGC TTGCGCTGTG CACGGCCGGC TACACGGCCG AGATCCTGCG CGGCGGGCTG
ATGGCCGTAC CGGTCGGGCA GATCGAGGCC GGGTATTCCA TCGGCCTGTC GGGCTTCTCG
CTGCTGCGGC GCGTGATCGG CCCGATCGCG TTGCGCCAGT GTCTGCCGGC GTATTCGACC
GAAGCCGTGC TGCTCGTCAA GTCGACCGCG CTGGCGAGCC TCGTCACGGT GTGGGAAGTG
ACGGGCGTCG CGCAGCAGAT CATTCAGCAA ACCTACCGGA CGACCGAAGT GTTCGTCTGC
GCGGCCATCA TCTATCTGGG CCTGAACTTC ATCGTCGTGC GCGTGCTCGG CGCGCTCGAA
TGGCGGCTCT CGGGGCACCT GCGTGCGCCG AAGCCGTCCG GCGCGCCCGC CGCGGCGACC
CGCAATACCC AGCGCGTCGC GTCCTGA
|
|---|
| Protein sequence | MSIDFAFLLD TLRQLLAAVP TTLGLFFASL VLGGLLSLVI VTMRVSPRWL PNRFARAYIL
VFRGSPLLIQ MFLVYYGLGQ FGVIRESFMW PLLREPYVCA VLSLALCTAG YTAEILRGGL
MAVPVGQIEA GYSIGLSGFS LLRRVIGPIA LRQCLPAYST EAVLLVKSTA LASLVTVWEV
TGVAQQIIQQ TYRTTEVFVC AAIIYLGLNF IVVRVLGALE WRLSGHLRAP KPSGAPAAAT
RNTQRVAS
|
|---|
| |