Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_6102 |
Symbol | |
ID | 4454377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | + |
Start bp | 255964 |
End bp | 257142 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639698162 |
Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
Protein accession | YP_839727 |
Protein GI | 116686480 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1125] ABC-type proline/glycine betaine transport systems, ATPase components |
TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAAC TCGACAAACT GACCAAGACC TTCACGCGCA AGGACGGCCA GGCCGTACGC GCGGTCGACT CCGTGAGCCT GTCGGTGCCC GAAGGGGAAA TCTGCGTGTT CCTCGGCCCG TCGGGCTGCG GCAAGACCAC CACGCTCAAG ATGATCAACC GGCTGATCGC CGCGACCTCG GGCCGCGTGC TCATCAACGG CGAGGATACG GCGCAGCTCG ACGAAGTGGA CCTGCGGCGC CACATCGGCT ACGTGATCCA GCAGATCGGG CTGTTTCCGA ACATGACGAT CGAGGAAAAC ATCACCGTCG TGCCGCGCCT GCTCGGCTGG GACAAGAAGC GCTGCGCCGA ACGCGCGCGC GACCTGATGT CGATGGTCGC GCTCGACCCG AAGCTGTACC TGAAACGCTA TCCGCGCGAG CTGTCGGGCG GGCAGCAGCA GCGCATCGGC GTGATTCGCG CGCTGGCCGC CGATCCGCCC GTGCTGCTGA TGGACGAGCC GTTCGGCGCG GTCGATCCGA TCAACCGCGA ATCGATCCAG AACGAGTTCT TCCAGATGCA GCGGCAACTG AACAAGACCG TGATCATGGT GAGCCACGAC ATCGACGAAG CGATCAAGCT GGGCGATCGC ATCGCCGTGT TCCGGCGCGG CCAGCTCGTG CAGTACGATC ACCCCGACAC GCTGCTGGCG CGCCCGCGCG ACGAATTCGT CGCGCAGTTC GTCGGCCAGG ACAGCACGCT CAAGCGCCTG CTGCTCGTGA AGGCCGGCGA CGCCGCCACG CAACCCGAAA CGGCGCGCGT CGATACGCCA CTCGCGCATG CCTTGGCGGT CATGGACGAA ACCGACTGCC GCTATCTGAC CGTGCTCGAC GACGCGGGCC GGGCGCTCGG CTACGTGACG CGCCGCGCGG CACGCACCGA CGGCGGCGGC GTGTGCGGCG AACGCGTGAC GCCGTTCCCG GCCGGCGTCG CGGCGGACGA CAACCTGCGC ATCGTGCTGT CGAAGATGTA TCAGTACAGT GTGTCGTGGA TGCCGGTGCT CGACCCCGAC GGCGCGTGGC TCGGCGAGAT CACGCAGGAT TCGATCGCCG CGTACCTCAG CTCGGGCCGA TCGCGCCGGC AAACCGGCCA GCCGCCGGGC AGCCCGGCCG AAGCGGTTGC GGCGGTCGCC ACGTCCTGA
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Protein sequence | MIELDKLTKT FTRKDGQAVR AVDSVSLSVP EGEICVFLGP SGCGKTTTLK MINRLIAATS GRVLINGEDT AQLDEVDLRR HIGYVIQQIG LFPNMTIEEN ITVVPRLLGW DKKRCAERAR DLMSMVALDP KLYLKRYPRE LSGGQQQRIG VIRALAADPP VLLMDEPFGA VDPINRESIQ NEFFQMQRQL NKTVIMVSHD IDEAIKLGDR IAVFRRGQLV QYDHPDTLLA RPRDEFVAQF VGQDSTLKRL LLVKAGDAAT QPETARVDTP LAHALAVMDE TDCRYLTVLD DAGRALGYVT RRAARTDGGG VCGERVTPFP AGVAADDNLR IVLSKMYQYS VSWMPVLDPD GAWLGEITQD SIAAYLSSGR SRRQTGQPPG SPAEAVAAVA TS
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