Gene Bcen2424_6092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6092 
Symbol 
ID4454402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp244938 
End bp246161 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content66% 
IMG OID639698152 
ProductABC-type branched-chain amino acid transport system periplasmic component 
Protein accessionYP_839717 
Protein GI116686470 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.299527 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAGCG TCAACTTGAA TCGCCGAGAA CTGTTGAAAC TGGCCGCGCT GTCGGCCGTG 
CCGGGCGCGC TCGGCAGCAT GTCGTCCCGG GTCGCGTTCG CGCAGGGCGC GCCCATCCAG
CTTGCCTGCC CGGTGCCGAT GTCCGGCCCG TTCGCCGCCA ACGGCAAGTA CGCCGATCTC
GGCATGCAGC TCGCCGTCAA GCAATACGGC AAGGTGCTCG GCGCGCCGCT CGCCTATACG
GCGCTCGACA CCGAGGGCAA GCCCGCGACG GCCGTGCGGC GCGTGCAGGA GATCGCGCAG
CAGAAGGGCG TGCGTTTCTT CGCGGGCGGC ATCCTGTCGT CCGAATCGCT GGCGATGGGC
AAGGAAGTCC AGAAGGCGGA CGGCGTGTTC ATCACGACGG CCGGCGCGGA CGAGATCACC
GGCAAGGACT GCAACGCGGC GACGTTCCGT TGGTCCGTGC CGACCTTCGG CGCGATCGAG
CAGACGGTGC GCCCGTTGAT CCAGATGCTG CCGAAGGCGA AGCGCTGGTA CACGATCACG
CCGCAATACG TGTTCGGCGA TGGCCTGCTG TCGGCCGCGA AGGCGGTCTT CAAGGAGAAG
GGCATCGAGC ACGTCGGCAA CAGCTATCAC TCGCTCGCCG AGAAGGAGTT CAGCGGCTAC
CTGACGAATG CGGCGGCCGC GCAGCCGGAC GTGCTGCTGA TCCTGAACTT CGGCTCGCAA
TCGTCGGACA CGCTGCGCCA GGCCGTCAGC TTCGGGATGA AGCGCAACTG CACAATCCTG
CTCGCGTGGG CATCGGGCCT CGAGCAGTTC GAGGCGCTCG GGCCGGACAT CTGCGACGGC
GTGTATTTCG GCGCGCAGTA CTGGCACGGC ATCGATTCGC CGCTGAACCG CGATCTCGTG
AAGCGCGCGA ACGCCGCGTT CAAGGCGAAC CCGAACTACA GCCTCGCCGG CTCGTACATC
TGCTCGAAGA TCCTGATCGA CGCGATGGTG AAGGCCGGCA GCGCCGATCC GAAGAAGGTC
GTCGCGGCGA TGGAAGGGAT GAAGTACGAC GGCCTCACAG GCCCCGAGGA AATCCGCAAG
GGCGACCACC AGGTGCTGAA GAACTACTAC CTGCTGAAGG GCAAGCCGAA GAGCCGGATG
AAGAACGCGG ACGACTATGC CGACATCGTC AGCTCCGGCC AGTCGTTCCT GCCGCTCGAC
AAGACGGGCT GCAAGCTCGC GTGA
 
Protein sequence
MRSVNLNRRE LLKLAALSAV PGALGSMSSR VAFAQGAPIQ LACPVPMSGP FAANGKYADL 
GMQLAVKQYG KVLGAPLAYT ALDTEGKPAT AVRRVQEIAQ QKGVRFFAGG ILSSESLAMG
KEVQKADGVF ITTAGADEIT GKDCNAATFR WSVPTFGAIE QTVRPLIQML PKAKRWYTIT
PQYVFGDGLL SAAKAVFKEK GIEHVGNSYH SLAEKEFSGY LTNAAAAQPD VLLILNFGSQ
SSDTLRQAVS FGMKRNCTIL LAWASGLEQF EALGPDICDG VYFGAQYWHG IDSPLNRDLV
KRANAAFKAN PNYSLAGSYI CSKILIDAMV KAGSADPKKV VAAMEGMKYD GLTGPEEIRK
GDHQVLKNYY LLKGKPKSRM KNADDYADIV SSGQSFLPLD KTGCKLA