Gene Bcen2424_6090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6090 
Symbol 
ID4454400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp242967 
End bp244010 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content70% 
IMG OID639698150 
Productinner-membrane translocator 
Protein accessionYP_839715 
Protein GI116686468 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATT CGTCGAAACC GTTGCCGCCG GGCGCGGCGG CGTCGCAACG CCTGCGGCCG 
TGGCGCGGCC TGCTGCAGCG GCCGGAAGGC TGGCTCGCGG TGGTCGCCGC GTGCGTGTTG
CCGCTCGTGT TGAGTTCGGG CTCGCTCGCG ACTGAAGTGC TGGTGTTCGC GCTCGCCGCG
CTCGGCTGCA ACCTGCTGCT CGGGTACACG GGCCTGCTGT CGTTCGGGCA GGGCATCTTC
TTCGGGCTCG GCAGCTACGC GGCGGGGCTG GTGCTGACGC GCGGTGTCGC ATCGGTGAGC
GTCGCGCTGC TGGCGGCGGC GGTGCTCGGC GCCGTCGCGG CCGCGCTCGT CGGCTGGTTC
TCGATCCGGC AGCGCGGCAC TTACTTCGTG ATGCTGACGC TCGCGTTCGG GCAGTTGTTC
TACTTCCTCG CGTATACGAC GCCGGACGTG ACGGGCGGCG ACAACGGGCT GCTCGACATC
CCGCGCCCCG CGCTCGCCGC GTTCGGGCAT CCGCTCGTCG CGCTGGATTC GCCGTGGCGT
TACTACGGCT TCGTCGCGGT GCTGTTCGTC GCGGTGTTCT GGCTGCTGCT GCGCGTGTCG
CGCTCGGTGT TCGGCCGCAC GCTGCTCGCG ATTCGCGACA ACGAGGCGCG CGCGGCGGCG
GCCGGCTACG ACGTGAAACG CTTCAAGCTC GCGGCGTTCG TGATCTCGGG CGCGGTCACG
GGCCTGGCGG GGGCGCTGCA CGCGCTGATG ACGGGCATCG CGCCGCTGTC GAACATCGAC
TATCACACGA GCGAGATGAT CCTCGTGATG ACGGTGATCG GCGGCACGGG CAACCTGTTC
GCGTCGGTGC TCGGCGCGGC GTTCTACGTG CTGTTCGCGG ACTGGCTGTC GACGCTGTGG
CCGCGCTGGC TGCTGCTGCT CGGCCTCGTG CTGATCGCGG TCAGCCTGTT CATGCAGCGC
GGGTTGTGGG GGCTGGGCGA ACGCATCGTG GCGTCGCTGC GGCGTGGCGA TCGCGCGGCG
GCCACGGTCA AGGAGCGGCA ATGA
 
Protein sequence
MIDSSKPLPP GAAASQRLRP WRGLLQRPEG WLAVVAACVL PLVLSSGSLA TEVLVFALAA 
LGCNLLLGYT GLLSFGQGIF FGLGSYAAGL VLTRGVASVS VALLAAAVLG AVAAALVGWF
SIRQRGTYFV MLTLAFGQLF YFLAYTTPDV TGGDNGLLDI PRPALAAFGH PLVALDSPWR
YYGFVAVLFV AVFWLLLRVS RSVFGRTLLA IRDNEARAAA AGYDVKRFKL AAFVISGAVT
GLAGALHALM TGIAPLSNID YHTSEMILVM TVIGGTGNLF ASVLGAAFYV LFADWLSTLW
PRWLLLLGLV LIAVSLFMQR GLWGLGERIV ASLRRGDRAA ATVKERQ