Gene Bcen2424_6088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6088 
Symbol 
ID4454398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp241505 
End bp242206 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content68% 
IMG OID639698148 
ProductABC transporter related 
Protein accessionYP_839713 
Protein GI116686466 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.89804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTCG ACGTGAAGGA GGTGCACGCG TGCTACGGCA AGAGCCACGT GCTGCAGGGC 
ATTTCGCTGA ACGTGAACGA AGGCGAGACG GTGACGCTGC TCGGCCGCAA CGGCGCCGGT
AAATCGACGA CGCTGAAGAC GATCGCGGGC GTCGTCGCGC CGACCGGCGG CACGGTGACG
TTCGAGGGCC GGCCGGTGGC CGGGCAGCCG GCGCACCGGA TCGCCGCGGG CGGACTGTGC
TTCGTGCCCG AGCATCGCGG GATTTTCCGG CTGCTGTCGG TCGAGGAAAA CCTGCGGCTC
GGCGCGCGCC GCGATTCGCC GTGGCAGCTC GACGAGATCT ACCGGATCTT TCCGCGCCTG
AAGGAGCGCC GCCGCAACGG CGGTGCGCAG TTGTCGGGCG GCGAGCAGCA GATGCTCGCG
ATCGGCCGCG CGCTGATGAA TCATCCGCGG CTGCTGATGC TCGACGAGCC GGTCGAGGGG
CTCGCGCCGG TGATCGTCGA GGAGATCGTC GAGCAGTTGA AGCGGATCAA GGCGGCCGGC
GTCGCGATCC TGCTCGTCGA GCAGAACCTC GAAGTGTGCA CGCAGCTCGC GGACCGCCAC
TTCGTGATCG AACAGGGCGT GATCGTCTAC GAAGGCAGCA ACGCGGCGTT CGCGGCCGAT
CATGACGTGA AGGACCGCTA CCTGGGTGTC GGTGTGGCAT GA
 
Protein sequence
MMLDVKEVHA CYGKSHVLQG ISLNVNEGET VTLLGRNGAG KSTTLKTIAG VVAPTGGTVT 
FEGRPVAGQP AHRIAAGGLC FVPEHRGIFR LLSVEENLRL GARRDSPWQL DEIYRIFPRL
KERRRNGGAQ LSGGEQQMLA IGRALMNHPR LLMLDEPVEG LAPVIVEEIV EQLKRIKAAG
VAILLVEQNL EVCTQLADRH FVIEQGVIVY EGSNAAFAAD HDVKDRYLGV GVA