| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_6029 |
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| Symbol | |
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| ID | 4454235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008544 |
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| Strand | + |
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| Start bp | 177482 |
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| End bp | 179659 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639698089 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_839654 |
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| Protein GI | 116686407 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0491802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.885513 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTCC CCCTTTCCCG GCCCAATGTC CGGCCCAATG CCCGGCCGAA CCGGCGCCCG
CGCGTGCTCG GCCTGCTCGC CGCGCTGCTC GCCACCGCCG CGGCGCTCAC CGCGTGCGGC
GGCGACGAGG CGAGTACCGG CGGCGGCGCG GCGTCCACCG CACCGCCCGC CACCAGCGTG
TTCCAGGTCG GCACGACGAC CGTCGACCCG AACCTGCCGG CCGAACCGGC GCTGCCCGCC
GATACGCAGG TATGCAGCAC GCTCGAAGCC GCCAATACGC TCGTGAGCCG CCCCGACGGC
TCGCTGCCGC CGGAGGCCGA CCCGTCGACG GCCGGCGTCG GCAAGGCCGT GCCGGCCGCG
ACGGCCAACC CCGATCAGGC GCGCATCCAG GCCGCGCTCG ACGCGTGCGG CGCGGCGGTC
GACGCTGAAG TCGGCGCGAC GATCGCGGCG GCGGACGCCG CGGCCACCGC CGCGCAAAAG
GCGGCCGCCG CGCCGAACGT GAACCTCGCC GGCGCATCCG GCGAGGAACT CGCGAAGCCG
AAGTACCGCG CGAGCAAATT CGCGGTGCGG CTCGTCGTCA ATCACGCGGG GCCCGGCAAC
GGCTTCATCA GCGGGCCGCT GACGCTGCCG TCCGGCGTCA CGCTGTGGAT CGACAAGGGC
GTCACGCTGT ATGCATCGCG CGACGTGAAG GCGTATTCGC CGAACGCCGC CGGGCCGTAC
TGCGGCAACA CGGCCGTCAG CGCGACGAAA GCCGGCAGCT CGTCGAACTG CGCCGCGCTG
ATCACCGGCA CCAACCTCGT CAACGCGGCG GTGGTCGGCG ACGGCCGGAT CGACGGGCGC
GGCTACGCGG AGCTCGTGAC GTCCGATGCG AAATACCCGC TGATGAAGGT CGACCTGACG
TGCTCGAACA CCTACGCGGC CTACAAGAGC GGCACCGTGG CGCCCGACGG CACCGCGTGC
GACGACGGCG GCACCGTCGT CGATTCGAAA TCGACGGTGC GCAACATGAC GTGGTGGGAT
CTCGCGTATC TCGGCAACAT GGTGCAGAAC GGCACGACCG GCTTCGGCTC GCAGTCGAAT
TTCCGGCTGA TGGTGTTCAA CTACGCGAAG AACCTCACGC TGTACCGCAT CACGCTGAAC
AACAGCCCGA ATTTCCACGT GGTGCCGAGC GGCGTCGACG GGCTGACGAT CTGGAACGTG
AAGGTGCAGA CGCCGACGCT CGCCGCGTTC GCGAACCCGG CCGGCAACGG CAACCCGCTG
TACAACGGGC AGACCTTCAA CGCGGACAAC GTGAAGAACA CCGACGCGTT CGACCCGGGC
GCCGCGTCGA AGCCGACCTC GGCGGCGCTG TCGACCGGCA GCACGACGAC GTCCGCCGCC
GCGATCTCGT TCGACGGCTA CCTGAAGAAC TTCGTGTTCG CATACAACTA CGTGAGCACC
GGCGACGACG ACATCGCGCT CAAGGGCAGC AACAATCCGG CGCCCGCCGG CTCCGGGCTG
TTCGGCATCG ACGGCAATCG CGACGTGCGC GCCGATCGCA AATGGGGCGT CGTGATCGCG
CACAATCACA TCTACTGGGG GCACGGCATC TCGATCGGCA GCGAGACCAA CGGCGGCGTG
ACCAACGTTC AGGTGTACGA CAATGCGTTC CGCGATTCGG AAGAAGGGCT GCGCATCAAG
TCCGACTATG CGCGCGGCGG CGAAGTGAGC AACATCCACT ACGCGAACAT CTGCATCCGC
GACGCGAAGA ACGCGCTGCT GTTCACGCCG TACTACAGCA CGAAGGCCGT GCCCGCGAGC
GGCCCGCTGT ACCCGAACTT CCACGACATC TCGCTCGCGA ACGTCGTGAT CGAGGGGGCG
GCCGGCGTGA AGCTGCAGGG GTTCGAGGCG AACACCGGCG GCTACGGCGA GCCCGCGTTC
CCGCTCGTGA TGTCGCTGAC CGACGTGGTG GCCGATACGC CCGACAGCAT CGCGACGATC
GCATCCGACG CGAACCTCAC GCTGCGCAAC GTGAACCTGC CGGTGTTCCC GTCGACCGCG
AACCGGGTCG CCGTCAACGG CACGGCGGTC CATGCGATCG ACCCGGCCAG CGTGCTCGAC
TGCAGCAAGG CATTCGTCGA CTTCCCGGGC ATCGACCAGT CGAACCCGTT CGGGTCGACG
TGGGCGCCGG CGCTGTAG
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| Protein sequence | MTLPLSRPNV RPNARPNRRP RVLGLLAALL ATAAALTACG GDEASTGGGA ASTAPPATSV
FQVGTTTVDP NLPAEPALPA DTQVCSTLEA ANTLVSRPDG SLPPEADPST AGVGKAVPAA
TANPDQARIQ AALDACGAAV DAEVGATIAA ADAAATAAQK AAAAPNVNLA GASGEELAKP
KYRASKFAVR LVVNHAGPGN GFISGPLTLP SGVTLWIDKG VTLYASRDVK AYSPNAAGPY
CGNTAVSATK AGSSSNCAAL ITGTNLVNAA VVGDGRIDGR GYAELVTSDA KYPLMKVDLT
CSNTYAAYKS GTVAPDGTAC DDGGTVVDSK STVRNMTWWD LAYLGNMVQN GTTGFGSQSN
FRLMVFNYAK NLTLYRITLN NSPNFHVVPS GVDGLTIWNV KVQTPTLAAF ANPAGNGNPL
YNGQTFNADN VKNTDAFDPG AASKPTSAAL STGSTTTSAA AISFDGYLKN FVFAYNYVST
GDDDIALKGS NNPAPAGSGL FGIDGNRDVR ADRKWGVVIA HNHIYWGHGI SIGSETNGGV
TNVQVYDNAF RDSEEGLRIK SDYARGGEVS NIHYANICIR DAKNALLFTP YYSTKAVPAS
GPLYPNFHDI SLANVVIEGA AGVKLQGFEA NTGGYGEPAF PLVMSLTDVV ADTPDSIATI
ASDANLTLRN VNLPVFPSTA NRVAVNGTAV HAIDPASVLD CSKAFVDFPG IDQSNPFGST
WAPAL
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