Gene Bcen2424_6025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6025 
Symbol 
ID4454231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp172797 
End bp173888 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content68% 
IMG OID639698085 
Product3-carboxymuconate cyclase-like protein 
Protein accessionYP_839650 
Protein GI116686403 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2706] 3-carboxymuconate cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGA CTCTCCTGCG GCGCGCCGTG GCGGCGGTTG CGTTGACGAT GGCGGCCTCG 
CTCGCGCACG CGGCGACGTA TGCATACGTG TCGAACAGCG ACAGCCGCGA TATCTCGGTG
TTCAGCGTCG ACACGGCGAA CGGTGCGCTG ACCGCGATCG AAACCGTGCC GGTCGACGGC
ACCGTGATGC CGATGGCGTT GTCGCCCGAT CATCGGCGCC TGTACGCGGC ATTGCGTTCG
ACGCCGTATC GCGTCGTCAG CTTCGCGATC AATCCGCTCG ACGGGCGGCT GATCGAGCTG
GGCCGCGCGC CGCTCGCGGA CAGCATGGCG TACGTGTCGA CCGATGCGTC GGGCCGCTAC
CTGTTCTCGG CGTCGTATGG CGGCAACCTG CTCGCGGTGA ACCGGATCGG CGCGGACGGC
GTCGCGGGCG ACGTGCGGCA GACGGTGAAG ACCGGCCCGA TGGCGCACGC GATCCGCCAG
TCGCCGGACG GCCGCTACGC GTTCGCGTCG GTGCTCGGCG CGGATGCGTG GTTGCGCTTG
CCGTTCGATG CGTCGACGGG AATACTGACC GACGACACGA CGCCCGCGTA CCGGCTGCCC
GACAAGTCGG GCCCGCGCCA TTTCGTGTTC TCGTCGAACG GCCGCTTCGC GTACCTGATC
GACGAACTCG ACGGCAAGCT GCACGTGCTC GCGCTGTCGC ACGGCGACGC CGATGCGCGG
CCGATCCAGA CCGTGTCGAT CCTGCCGCCC GATTTTCACG GCGACAAGCC GTGGGGCGCC
GATCTCCATC TGACGCCGGA CGGGCGTTTC CTGTACGCAT CGGAGCGCAC GTCGAGCACG
CTCGCCGGGT ATCGCGTCGA TGCGACATCG GGCAGGCTCG CGCGGATCGG CACGTTCGCG
ACCGAACAGC AGCCGCGCGG TTTTGCGATC GATCCGTCGG GCAAGTATCT GCTCGCGGCG
GGGCAGCTGT CGCCGACGCT GGCCGTGTAC CGGATCGACG GCCACACCGG GCATCTCGAC
GCGATCGGCA AGTATCCGGT CGGCAAGGGC GCGAACTGGA TCGAGATCGT CACGTACGAC
GGGACGAACT GA
 
Protein sequence
MKTTLLRRAV AAVALTMAAS LAHAATYAYV SNSDSRDISV FSVDTANGAL TAIETVPVDG 
TVMPMALSPD HRRLYAALRS TPYRVVSFAI NPLDGRLIEL GRAPLADSMA YVSTDASGRY
LFSASYGGNL LAVNRIGADG VAGDVRQTVK TGPMAHAIRQ SPDGRYAFAS VLGADAWLRL
PFDASTGILT DDTTPAYRLP DKSGPRHFVF SSNGRFAYLI DELDGKLHVL ALSHGDADAR
PIQTVSILPP DFHGDKPWGA DLHLTPDGRF LYASERTSST LAGYRVDATS GRLARIGTFA
TEQQPRGFAI DPSGKYLLAA GQLSPTLAVY RIDGHTGHLD AIGKYPVGKG ANWIEIVTYD
GTN