Gene Bcen2424_6021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6021 
Symbol 
ID4454767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp169408 
End bp170487 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content71% 
IMG OID639698081 
ProductABC-2 type transporter 
Protein accessionYP_839646 
Protein GI116686399 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.679719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAGG TGTTCCTGAT CCTCGTGCGC AACGAGCTGC TCGGCTATCT GCGCAGCCGC 
TCGTCGCTGT TCTGGACGCT GGTGTTCCCG GTGTTCCTGC TGAGCGTGAT GCTGTTCGCG
TTCGGCGGCT CGGGCTCGCT CGGCACGGCC GACATCGCGT TCGACGTGCC CGGCGGCGCG
ACGCCGTACA ACCAGGCGTG CAAGGCGGAG ATCGTCGCCA GCCTGTCGCA CAGCGACACG
GTGAAGGCGA CCTTCGGCGG CCGCGGCACG CCGGCCGAGC GCGTGACCGT CGTGCTCGGC
GCCGACGAGC GCACGCCGGC GACGATCCGC TACGACTTCA ACGGCTCGCT CGCGGTGAAG
GCCGCGTCGC GGGTCGTCGA GATCGCGCTC GCACGCTGCG CCGCGCAGCG GCTCGGACTG
CCGGCCGCGC AGGCGCGCTT CGAGAATGCC GCGCCCACGC GCCGCCCGTT CGACTACGGC
GCGTTCTTCG CGACCGGCAT CCTCGTGATG GCGTTCATGG CGATCGGCCT CAACTCGACG
ACCACCGCGA TCGCGGCGCT GCGCGAGCGC AATACGTTCA AGCTGTACGT GTGCTTCCCG
GTGTCGCGCG GCGTATTCCT CGCCGCGCTG ATCGTCGCGC GGATGGCGAT GATGGCGCTG
TCGGCGCTCG TGCTGCTGAC GGTCGCGCGC GTCGCGTTCG GCATCGCGCT GCCGATCGCG
ACGCCGGACG GGCTGCGCGC ATTGCCGATC GTGCTGCTCG GCGCGGCGAT GGTGCTGAGC
ATCGGCGTGC TGCTGGCCAG CCGCACCCGC TCGCTCGCGG CCGCCGAACT CGCGTGCAAC
GTCACCTACT ACCCGCTGCT GTTCTTCAGC GACCTGACGA TCCCGATGCA CGACGCGCCC
GCGTGGCTGA AGGCCGGGCT CGCGTTCCTG CCGACCAACC AGTTCGCCGT CGCGCTGCGC
GGCGCGCTGG TCGACGGCGC GCCGTACGCG CAGCTCGCGC CGCAACTGCT CGGCATGACC
GCGTGCACCG CGCTGTTCCT GTTCGCCGCC GCGCGGCTGT TCCGCTGGCA CGACGCCTGA
 
Protein sequence
MTKVFLILVR NELLGYLRSR SSLFWTLVFP VFLLSVMLFA FGGSGSLGTA DIAFDVPGGA 
TPYNQACKAE IVASLSHSDT VKATFGGRGT PAERVTVVLG ADERTPATIR YDFNGSLAVK
AASRVVEIAL ARCAAQRLGL PAAQARFENA APTRRPFDYG AFFATGILVM AFMAIGLNST
TTAIAALRER NTFKLYVCFP VSRGVFLAAL IVARMAMMAL SALVLLTVAR VAFGIALPIA
TPDGLRALPI VLLGAAMVLS IGVLLASRTR SLAAAELACN VTYYPLLFFS DLTIPMHDAP
AWLKAGLAFL PTNQFAVALR GALVDGAPYA QLAPQLLGMT ACTALFLFAA ARLFRWHDA