Gene Bcen2424_6001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_6001 
Symbol 
ID4454747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp147660 
End bp148607 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content65% 
IMG OID639698061 
Productfatty acid desaturase 
Protein accessionYP_839626 
Protein GI116686379 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGCC GCCCGAGCGG CGTGGTCTTC TCGCTGAAGC TGGTGGTCTA CGCAGCGCTC 
ATCGCGCACG GGATGATGTT CGCGCTGTCG GCGCTCGTGA TCCTGAAGAT CGTCGGCATC
CTGCTGATCG GTGCGATGTA TGCGCACGGC GTCGAGCTGC AGCACCAGGC GCTGCATTAC
CAGGGGTTTC GCAGCAAGCG CCTGAACATG GTGTTCGGCG TGCTGCTCGG CATGCCGATG
CTCGTGTCGT TCCATGCGTA CCAGGACAGC CACCTGCGTC ATCACCGGCT GCTCGGCACG
CCGGAGAACA AGGAGTTCTT CGACTACGGC GACCAGTACG GCGCGAGCCC CGTCGTCAAT
GTCGGGCTGT GGGCCTGGCG GCTGTCGATG GCCGCGCACT ATATCCAGTT CGCGAAGAAC
GTCGCGAAGC TCGTCGTGCC GGGCGCGCGC TTCGGCGACA ACGCGCTCGT GTCGCGCGCG
ATCCGCCGCG ACTATCTGCT GATGGCCGCG GCGATCGCGC TGCTGGCCGC GCTGTCGTTC
GCCTTGCACA CGTGGTGCGT CGTCTGGGTG TGGGTCGTGC CGCTCGTGTT CGTCGCGGCG
CCCGTGCATG CGCTGGTCGA AATGCCGGAG CACTATCGCT GCGACCTGAC GAGTACCGAT
CCGTTCCGCA ACACGCGGAC GATCGAGAGC AACGCGTTCA TGACGTGGTT CACGAACGGC
AACAACTATC ACGTCGAGCA TCACATGATG CCGAGCCTGC CGATCGAGCG GTTGCACGAT
CTGCATGGCG CGATCGCGCC GCGCATCCGC TATTACCACC GCACGTATCG GCAGTTCTAC
TACGCGTTGC TGCGCGGCCG GCTGTCGCCG CGCTCGGTGG ACGACGATCG GGACGATCGA
GAGCCCGATG CCGAAGCGGC TGCGCCGGCG TCCACGCAAT CGGCGTGA
 
Protein sequence
MKSRPSGVVF SLKLVVYAAL IAHGMMFALS ALVILKIVGI LLIGAMYAHG VELQHQALHY 
QGFRSKRLNM VFGVLLGMPM LVSFHAYQDS HLRHHRLLGT PENKEFFDYG DQYGASPVVN
VGLWAWRLSM AAHYIQFAKN VAKLVVPGAR FGDNALVSRA IRRDYLLMAA AIALLAALSF
ALHTWCVVWV WVVPLVFVAA PVHALVEMPE HYRCDLTSTD PFRNTRTIES NAFMTWFTNG
NNYHVEHHMM PSLPIERLHD LHGAIAPRIR YYHRTYRQFY YALLRGRLSP RSVDDDRDDR
EPDAEAAAPA STQSA