| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5997 |
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| Symbol | |
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| ID | 4454743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008544 |
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| Strand | + |
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| Start bp | 142664 |
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| End bp | 144133 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639698057 |
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| Product | general substrate transporter |
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| Protein accession | YP_839622 |
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| Protein GI | 116686375 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.306288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCCCGT CGCAAGCGCG CCCCGCGAAA ACCCGGTCTT CGCGCCAGTC CATCAAGCTG
GATGACATCA CGATCGTCGA CCCGGCCGTC CTCAAGCGCG CGGTCGGCGC GATGGCGTTC
GGCAACGCGA TGGAATGGTT CGACTTCGGC GTCTACAGCT ATATCGCCGT CACGCTCGGC
AAGGTGTTCT TCCCGTCCAG CAGCCCGTCC GCGCAGTTGC TGGCCACCTT CGGCACGTTC
GCGGCCGCGT TCCTCGTGCG CCCGCTCGGC GGCATGGTGT TCGGCCCGCT CGGCGACCGC
ATCGGCCGCC AGCGCGTGCT CGCCGCCACG ATGATCATGA TGGCCGTCGG CACCTTCGCG
ATCGGCCTGA TCCCGAGCTA TGCGTCGATC GGCATCATGG CCCCGATCCT GCTGCTCGTC
GCGCGGCTCG TGCAGGGCTT CTCGACCGGC GGCGAATACG GCGGCGCCGC CACCTTCATC
GCCGAGTTCG CGACCGACAG GCGCCGCGGC TTCATGGGCA GCTTCCTCGA GTTCGGCACG
CTGATCGGCT ATACGCTCGG CGCGGCCACG GTCGCGCTGC TGACGGCCAC GCTGTCGCAG
GAAACGCTGC TGTCGTGGGG CTGGCGCGTG CCGTTCTTCA TCGCCGGCCC GCTCGGCCTC
GTCGGCCTCT ACGTACGGCT CAAGCTGGAG GAAACGCCGG CCTTCAAAAA GGAAGCCGAA
GCGCGCGAAG CGGACGAACG CGCGCGGCCG AAACAGCGCT TCGCGACGCT GCTCGTCGAA
CAGTGGAAGC CGCTGCTGCA ATGCGTCGGC CTCGTGCTGA TCTTCAACGT GACCGACTAC
ATGGCGCTGT CGTACCTGCC GAGCTACCTG TCGGCGACGC TGCACGTGCG CGAATCGCAC
GGGCTCTTCA TGGTGCTGCT CGTGATGGTG CTGATGATGC CGATGACGCT GTACGCCGGG
CACCTGTCGG ACAAGGTCGG CCGCAAGCCG GTGATGATGG CCGGCTGCGT GGGCCTGCTC
GCGCTGTCGG TGCCGGCGCT GATGCTGATC CGCACCGGCG GCACGCTGCC GATCTTCGGC
GGGATGCTGA TTTACGGCGT CCTGCTGTCG ACGTTCACGG GCGTGATGCC GTCGGCGCTG
CCCGCGCTGT TCCCGACGCG GATACGCTAC GGTGCGCTCG CGATCGGCTT CAACGTGTCG
GTGTCGCTGT TCGGCGGCAC GACGCCGCTC GTCACCGCGT GGCTGGTCGA TCGCACCGGC
GACCTGATGA TGCCCGCCTA CTACCTGATG GGTGCGTCGT TCATCGGCAT CGTGTCAGTG
CTCGCGCTGC GCGAGACCGC ACGCCAGCCG CTGCCCGGCT CCGGGCCGTG CGTGGCGAGC
CGCGCGGAAG CATTGAACCT CGTACGCGGC GGCGCCGACG AAGCGCGTGT GCGCGACCGG
AAGTTCACGC CGGTCAGCGA GCGTGCGTGA
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| Protein sequence | MSPSQARPAK TRSSRQSIKL DDITIVDPAV LKRAVGAMAF GNAMEWFDFG VYSYIAVTLG
KVFFPSSSPS AQLLATFGTF AAAFLVRPLG GMVFGPLGDR IGRQRVLAAT MIMMAVGTFA
IGLIPSYASI GIMAPILLLV ARLVQGFSTG GEYGGAATFI AEFATDRRRG FMGSFLEFGT
LIGYTLGAAT VALLTATLSQ ETLLSWGWRV PFFIAGPLGL VGLYVRLKLE ETPAFKKEAE
AREADERARP KQRFATLLVE QWKPLLQCVG LVLIFNVTDY MALSYLPSYL SATLHVRESH
GLFMVLLVMV LMMPMTLYAG HLSDKVGRKP VMMAGCVGLL ALSVPALMLI RTGGTLPIFG
GMLIYGVLLS TFTGVMPSAL PALFPTRIRY GALAIGFNVS VSLFGGTTPL VTAWLVDRTG
DLMMPAYYLM GASFIGIVSV LALRETARQP LPGSGPCVAS RAEALNLVRG GADEARVRDR
KFTPVSERA
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