Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5990 |
Symbol | |
ID | 4454736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | - |
Start bp | 134732 |
End bp | 135775 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639698050 |
Product | inner-membrane translocator |
Protein accession | YP_839615 |
Protein GI | 116686368 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.360889 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0707183 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCGGC TACGCACGCT GTTTCGTCAT TCGCTCGCGT GGCCGGTGCT GACGCTCGCG CTGCTGTTCG CGCTGGATGT CGCGTATCGT CCCGGCTTCC TGTCGATCGC GCTGCTCGAC GGCCACCTGT TCGGCGCGCC GATCGACATC CTGAACCGTG CGGCGCCGCT CGTGATCGTG TCGCTCGGGA TGACGCTCGT GATCGCGACG CGCGGGATCG ACATCTCGGT CGGCGCGATC GTCGCGATCG CCGGCGCGGC GGCCGCGACC GTGCTCGAGG CGGACCCGTC GCAAGTCGGC ACGGCGCTGG CCGCCGCGCT CGGCGTCGGG CTGCTGGCCG GTGCGTGGAA CGGGCTGCTG GTCGCGTTCG TCGGGATGCA GCCGATCATC GCGACACTGA TCCTGATGGT GGCCGGCCGC GGCGTCGCGC AACTGCTGAC CGGCGGCCAG ATCATCCCGA TCGGCGCGCC CGGCTACCTC GCGCTCGGCG GCGGCTATCT GGCGACCGTG CCGTGCGCGG TGTGGATCGC GCTCGCGACG ATCGGCGCGA CCGCGCTGCT GGTGAACCGT ACGGCGCTCG GGCTGTTCAT TCGGGCGATC GGCGTGAACC CGGTCGCGAC GCGGCTCGTC GGGCTGCGCT CGGGTGCGGT CGTGTTCGGC GTGTATCTGT GCTCGGGCGT GATGTCGGCG CTCGCGGGTA TCCTCGCGAG CTCGAACGTG CGCAGTGCCG ACGGCAACAA CGCGGGGCTG CTGCTCGAAC TCGACGCGAT CCTCGCGGTG ACGCTCGGCG GCACGTCGCT GCTCGGCGGC CGCTTCAGCC TCGCGGGCTC GGTGCTCGGC GCGCTGATCA TCCAGACGCT CACCTACACG ACCTATTCGA TCGGCGTGCC GCCGGAGGCG ACGCTCGTCG TCAAGGCGGT CGTCGTGATC GTCGTGACGC TGATCCAGTC GGACGCGGCA CGCGCGCTGC TCGTGCGGCA CGCGTCGCGG CTGCTGCCTT CCGCGCGATC GCGCGCCACC ACCACCGGAG CGACGCCGCG ATGA
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Protein sequence | MMRLRTLFRH SLAWPVLTLA LLFALDVAYR PGFLSIALLD GHLFGAPIDI LNRAAPLVIV SLGMTLVIAT RGIDISVGAI VAIAGAAAAT VLEADPSQVG TALAAALGVG LLAGAWNGLL VAFVGMQPII ATLILMVAGR GVAQLLTGGQ IIPIGAPGYL ALGGGYLATV PCAVWIALAT IGATALLVNR TALGLFIRAI GVNPVATRLV GLRSGAVVFG VYLCSGVMSA LAGILASSNV RSADGNNAGL LLELDAILAV TLGGTSLLGG RFSLAGSVLG ALIIQTLTYT TYSIGVPPEA TLVVKAVVVI VVTLIQSDAA RALLVRHASR LLPSARSRAT TTGATPR
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