Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5979 |
Symbol | |
ID | 4454707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | + |
Start bp | 121746 |
End bp | 122348 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639698040 |
Product | TetR family transcriptional regulator |
Protein accession | YP_839605 |
Protein GI | 116686358 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00000443748 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000881636 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCAATT CCGCCGAAGC AGAATCGCCA TCGCCTCGCC GCCGTCCTGG CGGCCGCAGC GCGCGCGTCC GTGATGCCGT GGTCGCGGCA ACCATCGCCC AATTGCAGGA ATCCGGTTTC GAGGGGCTCA GCATCGGCGT GGTCGCCGCG CTTTCCGGCG TGAACGAGAG TTCGATCTAT CGCCGCTGGA AGAGCAAGGA AGGGCTGGTG ATGGAAGCCG TGTTCGAGCT TTTTGCCGAG AACATCGTGA TCCCCAATCG GGGTTCACTG CACGCGGATC TCGTCGCGCT CATGTCGGCA ACCGTGCGCT ACTTGCGCAC CGGGGTGGGC CGGTCAGCGA TCCAGTTCGT GCTCGCCACC TACAGCGACG CCGGCGTCAC CAGCGAGTTG CACCGGCTGT GGACCAACCG GTTTTCGGCG GTCCAGCAGA TTTTCGAACG CGCGACGCAG CGGGGAGAGT GGCACAGGGG CGCGGACCCG ATGCCGTTGC TTCACTGCCT CATCGGCGCG GTGTATCTGC GAACGTTCAT GCTGCGCGAA CGCGTCACGG TCAATCAGCT TCGGGAATTG ACGCTGTGGC TGCTGCGCGG GCAAAACGCC TGA
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Protein sequence | MSNSAEAESP SPRRRPGGRS ARVRDAVVAA TIAQLQESGF EGLSIGVVAA LSGVNESSIY RRWKSKEGLV MEAVFELFAE NIVIPNRGSL HADLVALMSA TVRYLRTGVG RSAIQFVLAT YSDAGVTSEL HRLWTNRFSA VQQIFERATQ RGEWHRGADP MPLLHCLIGA VYLRTFMLRE RVTVNQLREL TLWLLRGQNA
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