Gene Bcen2424_5979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5979 
Symbol 
ID4454707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp121746 
End bp122348 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content64% 
IMG OID639698040 
ProductTetR family transcriptional regulator 
Protein accessionYP_839605 
Protein GI116686358 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000443748 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000881636 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCAATT CCGCCGAAGC AGAATCGCCA TCGCCTCGCC GCCGTCCTGG CGGCCGCAGC 
GCGCGCGTCC GTGATGCCGT GGTCGCGGCA ACCATCGCCC AATTGCAGGA ATCCGGTTTC
GAGGGGCTCA GCATCGGCGT GGTCGCCGCG CTTTCCGGCG TGAACGAGAG TTCGATCTAT
CGCCGCTGGA AGAGCAAGGA AGGGCTGGTG ATGGAAGCCG TGTTCGAGCT TTTTGCCGAG
AACATCGTGA TCCCCAATCG GGGTTCACTG CACGCGGATC TCGTCGCGCT CATGTCGGCA
ACCGTGCGCT ACTTGCGCAC CGGGGTGGGC CGGTCAGCGA TCCAGTTCGT GCTCGCCACC
TACAGCGACG CCGGCGTCAC CAGCGAGTTG CACCGGCTGT GGACCAACCG GTTTTCGGCG
GTCCAGCAGA TTTTCGAACG CGCGACGCAG CGGGGAGAGT GGCACAGGGG CGCGGACCCG
ATGCCGTTGC TTCACTGCCT CATCGGCGCG GTGTATCTGC GAACGTTCAT GCTGCGCGAA
CGCGTCACGG TCAATCAGCT TCGGGAATTG ACGCTGTGGC TGCTGCGCGG GCAAAACGCC
TGA
 
Protein sequence
MSNSAEAESP SPRRRPGGRS ARVRDAVVAA TIAQLQESGF EGLSIGVVAA LSGVNESSIY 
RRWKSKEGLV MEAVFELFAE NIVIPNRGSL HADLVALMSA TVRYLRTGVG RSAIQFVLAT
YSDAGVTSEL HRLWTNRFSA VQQIFERATQ RGEWHRGADP MPLLHCLIGA VYLRTFMLRE
RVTVNQLREL TLWLLRGQNA