| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5977 |
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| Symbol | |
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| ID | 4454705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008544 |
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| Strand | - |
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| Start bp | 119497 |
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| End bp | 120588 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639698038 |
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| Product | porin |
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| Protein accession | YP_839603 |
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| Protein GI | 116686356 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000297374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000158153 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAATCGGA AGAGGAGAGG CTGTCCGCTC AAGCGGATGC AGGCGGCAGC CGCCATGTTG
GCCGTCGGCG CGAGTGCGCA TGCACAAAGT ACGGTCACGC TGTACGGTGT CGTCGATGCC
GGCGTCATGT ACACGAGCCG CAGCTTCGAC GCGGGAACCG GGACGAACGG AGCGCATCGG
GTCTCGATGA CGGACGGCGG GATTTCCGGC TCCCATTTCG GGATAACCGG CGTCGAAGAT
CTCGGCGCCG GCACCAAGGC GATCTTTACG CTGGAAAGCG GTTTCACCAT GAACGACGGC
GCGCTGGGCA ATTCGAACGG CAACCTGTTC GGACGTCAGG CGTTCGTCGG GCTTTCGGGA
CGATTCGGAA CCGTCAAGGC CGGCATGCAG TACTCGCCGT TCGGGCTGGC GATCGTCGAC
ACGGACGCGC GGCACGCATC GTTCTTCGGC AGTCAGGCCG GCATCTACAT GGGCAATTTT
TTTGCGACGG GCATCTTCGT CGCCAATGCC GTGTCGTACA CGAGCCCGAC CGTGGCCGGT
CTTCAGGCGA GTGCGCTGCT GGCGCTGGGC GGCGATCCCG GGAAATTTCA GGCCGGCCGT
CAATACGCGG CGCGCTTGAG ATACGAGTGG CGAAACCTGG TGGCCAACGC GGCACTCTTC
AGCGGCAATC CCGGCGGTTC GACGAGTACG TCCACTCCGT TTCCGTCGAC GGTCGAATTC
GCGGGCCGCA CGATCGGCGC AGCGTATACG TGGGGCGCCG CGACGTTGAA AGGCTCGTAT
ACGAGCTACA AGATCGCCCA TTCCTTCAAC GAGAAGGTGT ACTCGGTCGG CGGCGAGTAT
TTGATCACGC CCACGTTGTC CACCGACGCG GGCGTCTGGT ACATGCGGGA CAGCAACGAT
TCGGCCAGCC ATGCGCTGCT GACGTCCGCC GGGCTGTACT ACTCCCTGTC GAAGCGAACG
ACGGTGTATG GCGCCGCGGC CTTCGTGAAC AACCATGGGT TGATGCATAC GGGGTTTACG
GTGAACGGCG CGCTCTACGC GCCGACCGGC GGCAGCACCA GTCTCGTCGT TGGCGCGCGC
CATCTCTTTT GA
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| Protein sequence | MNRKRRGCPL KRMQAAAAML AVGASAHAQS TVTLYGVVDA GVMYTSRSFD AGTGTNGAHR
VSMTDGGISG SHFGITGVED LGAGTKAIFT LESGFTMNDG ALGNSNGNLF GRQAFVGLSG
RFGTVKAGMQ YSPFGLAIVD TDARHASFFG SQAGIYMGNF FATGIFVANA VSYTSPTVAG
LQASALLALG GDPGKFQAGR QYAARLRYEW RNLVANAALF SGNPGGSTST STPFPSTVEF
AGRTIGAAYT WGAATLKGSY TSYKIAHSFN EKVYSVGGEY LITPTLSTDA GVWYMRDSND
SASHALLTSA GLYYSLSKRT TVYGAAAFVN NHGLMHTGFT VNGALYAPTG GSTSLVVGAR
HLF
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