Gene Bcen2424_5975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5975 
Symbol 
ID4454703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp117193 
End bp117999 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content61% 
IMG OID639698036 
Productcyclase family protein 
Protein accessionYP_839601 
Protein GI116686354 
COG category[R] General function prediction only 
COG ID[COG1878] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00514235 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000132794 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACACGAC GCTTCGTCGA TCTCTCGATC TATCTGGAAA ACGATGTCAT TTCCGATCCG 
CCGGGTTACG GCCCGACGAT TCAGTATCTG GCGCACGAGG AAACGGCCAA GAGCGTGACG
GCCTTCTTTC CCGGGCTGCA GGAACACGAC CTGCCGGACA GCGAAGGCTG GGCTATCGAG
CACGTCCGCT TGAGCACGCA CAACGGCACC CATCTCGATG CGCCTTATCA CTTTCACAGC
ACGATGAACG AATCGACGGG CGAGCGAGAG CGCGCGATCA CCATCGACGA GGTGCCACTG
GATTGGTGCT TCCAGCCGGG CGTGAAACTG GATTTCACCG ACCGAGCCGA TGGCTACGTC
GTTACTGCAG CCGACGTCGA AGCGGAGCTT TCACGCATCG ATCACGTCCT CAAACCGCTC
GAAATCGTCG TGGTCAATAC CCGCGCGGGG CTGCGCTACG GGCAACCCGA CTATGTATCG
AGCGGTTGCG GCATGGGCCT CGACGCCACC CTGTACCTGC TCGAACGTGG CGTCCGGTTG
ACCGGCACCG ATGCGTGGAG CTGGGATGCG CCGTTCGTGC ATACGGCCAG GAAATACGCC
GAGACGCACG ACGCATCGCT GATCTGGGAG GGGCACAAGG CGGGTCGCCA TATCGGCTAT
TGCCATCTGG AAAAGCTCCA CAACCTCGAG GTGCTGCCGC CTCACGGTTT TTTTGTCTCG
TGCTTCCCGC ACAAAATTCG CGGCGCCTCC GCGGGCTGGA CTCGCGCGGT CGCCATTTTC
GACGATGCAC TCAACGCCAC GGCTTGA
 
Protein sequence
MTRRFVDLSI YLENDVISDP PGYGPTIQYL AHEETAKSVT AFFPGLQEHD LPDSEGWAIE 
HVRLSTHNGT HLDAPYHFHS TMNESTGERE RAITIDEVPL DWCFQPGVKL DFTDRADGYV
VTAADVEAEL SRIDHVLKPL EIVVVNTRAG LRYGQPDYVS SGCGMGLDAT LYLLERGVRL
TGTDAWSWDA PFVHTARKYA ETHDASLIWE GHKAGRHIGY CHLEKLHNLE VLPPHGFFVS
CFPHKIRGAS AGWTRAVAIF DDALNATA