Gene Bcen2424_5974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5974 
Symbol 
ID4454702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand- 
Start bp116285 
End bp116968 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content65% 
IMG OID639698035 
ProductTetR family transcriptional regulator 
Protein accessionYP_839600 
Protein GI116686353 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0426648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones2 
Fosmid unclonability p-value0.00085933 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAGCAA GGAAAACCAC GAAGAAGGCA ACCGTCACGC GCGGCGAGGG GCGAGTGCAG 
GACGCGGCCC AGACGAGCAA GCGCGAGCGC GTCCTCGACG TGGCGGAGCG TCTGTTTGCC 
GAAGGGGGTT TCGACGGGGT GTCGATGCGG GATATCGCGT CGGCGGCAGA CGTCGGCTTG 
CCGCTGATCG TGTATCACTT CGAGACGAAG ATGGGGCTGT ATCGTGCGTT GTTCGAGCGC 
CGCAAAACCG TGCTGGACGC GCGGCTGGCG ATGCTGCGCG AGCCGGTGGC CGCGGGGGAA 
GATCCGCTCG AGCACATCGT GCGTGCGTTC GTGCTGCCCG TCATGCAGAT CCAGGGTACG 
GACGCCGGCC TTGCGTACGC GAAGCTCGTG GCACGTGAAG CATCCGATCC GCGCGAAGCG 
GAGCGCGGCA TCGTCGCCGA ATATTTCGAC CCGTTTGCGG CCGAATTCGT CGGCGCGATC 
AAAAAGGAGC TCCCCGGCCA TGGCGCCAGC TACGCCCATT GGGCCTACCT GTTCGCCGTC 
GGCGCGCTGG TGATGAGCGC GTTCGACAGC CGCATCGAGC GGATCTCGAA CGGCAAGGTC 
AAGGCGGGCG CGTTGAAGAG CAAGACCACG CATCTGGTGA CGTTCATTAC CGCTGGCATT 
CGGGCAGGCG CAACGCCGGT CTGA
 
Protein sequence
MQARKTTKKA TVTRGEGRVQ DAAQTSKRER VLDVAERLFA EGGFDGVSMR DIASAADVGL 
PLIVYHFETK MGLYRALFER RKTVLDARLA MLREPVAAGE DPLEHIVRAF VLPVMQIQGT 
DAGLAYAKLV AREASDPREA ERGIVAEYFD PFAAEFVGAI KKELPGHGAS YAHWAYLFAV 
GALVMSAFDS RIERISNGKV KAGALKSKTT HLVTFITAGI RAGATPV