Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5968 |
Symbol | |
ID | 4454696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | - |
Start bp | 103713 |
End bp | 105041 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639698029 |
Product | sodium:dicarboxylate symporter |
Protein accession | YP_839594 |
Protein GI | 116686347 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.431964 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00472549 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACACCG TCATCGACTC CCCGCCCGTC GTCGGCGCGG CCCGCAAGCC GCGCGTCGGG CTCGCGTGGC AGATCGTCAT CGGCCTCGTC ATCGGCATCG CGACCGGGCT CGTGCTGAAC CGGTTTCCGC AATTGCGCGA CACGGCCGTG TCCGGGTTGC TGCAGCCGGC CGGCGACATC TTCATCAAGC TGGTGCGGAT GATCGTCGTG CCGATCGTAT TCACGAGCAT GGTGATCGGC ATCGCCGGCG TGGGCGACGG CAAGTCGCTC GGACGCCTCG GCATCAAGAC GCTGCTCTAT TTCGAGGTGA TCACGACGAT CGCGATCGTG CTCGGGCTCG TGATCGGCAA CGTGCTGCAG CCGGGCGTCG GCACCGACAT GTCGCAACTC GGGCACACCG ACATTTCCCG TTACCAGCAG ACCACGCAAC AGGTGCAGCA GGCGCACCAC GGGCTGATGG CGCTGGTGCT CGGCATCATC CCGGACAACA TCGTCGCGTC GATGGCCAAG GGCGACCTGC TGCCGGTGAT CTTTTTCTCC CTGCTGTTCG GGCTCGGGCT GCAGTCGGTG CCGGAAGAGC ATCGCAAGCC GGTGCTCGCG ATGCTCAAGG GCGTCGCCGA CGCGATGTTC AAGGTGACGA ACATGGTGAT GCGCTATGCG CCGGTCGGCG TGTGCGCGCT GATCGCGGTG ACCGTTTCAA GTTTCGGTTT CGGCTCGCTG CTGCCGCTGC TGAAACTCGT CGCCGTCACT TACTTCGCGA TCCTGCTGTT CGCGATCGCC GTGCTCGGCG TGACCGCGCG GCTGTTCGGG TTCCGCATCC TGACGCTGCT GCGCGTGATC AAGGACGAAC TGATCATCGC GTTCTCGACC TGCAGTTCGG CGACCGTGCT GCCGCAACTG ATGAAGAAGA TGGAGGACTA CGGCGTGCCG AAGAGCATCA CGACGTTCGT GGTGCCGACC GGCTACACGT TCAACCTCGA CGGCGCGTCG ATCTATCTCG GCATCGGCAC GCTGTTCGTC GCGCAACTGT ATGGCGTGCA CCTCGGCTGG CAGCAGCAGG TGCTGCTGAC GCTGACCATG GTCGTCACGT CGAAGGGCGC CGCCGGTGTG CCGGGCTTCA TGTTCGTGAT CATGCTCGCG ACGCTCGCGA GCGCGGGATT GCCGCTCGAA GGGCTCGCGT TCATTGCCGG CGTCGACCGG ATCATGGACA TGGGCCGCAC CGCGCTGAAC GTCGTCGGCA ATGCGCTGGC GCCGCTCGTC ATCGCGAAAT GGGAAGGCCG GTACGACGCG GAGAAGGGCC GCGCGTACGT CGAATCGCTG CGCGGCTGA
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Protein sequence | MDTVIDSPPV VGAARKPRVG LAWQIVIGLV IGIATGLVLN RFPQLRDTAV SGLLQPAGDI FIKLVRMIVV PIVFTSMVIG IAGVGDGKSL GRLGIKTLLY FEVITTIAIV LGLVIGNVLQ PGVGTDMSQL GHTDISRYQQ TTQQVQQAHH GLMALVLGII PDNIVASMAK GDLLPVIFFS LLFGLGLQSV PEEHRKPVLA MLKGVADAMF KVTNMVMRYA PVGVCALIAV TVSSFGFGSL LPLLKLVAVT YFAILLFAIA VLGVTARLFG FRILTLLRVI KDELIIAFST CSSATVLPQL MKKMEDYGVP KSITTFVVPT GYTFNLDGAS IYLGIGTLFV AQLYGVHLGW QQQVLLTLTM VVTSKGAAGV PGFMFVIMLA TLASAGLPLE GLAFIAGVDR IMDMGRTALN VVGNALAPLV IAKWEGRYDA EKGRAYVESL RG
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