Gene Bcen2424_5950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5950 
Symbol 
ID4454507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp84559 
End bp85158 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content64% 
IMG OID639698011 
ProductThiJ/PfpI domain-containing protein 
Protein accessionYP_839576 
Protein GI116686329 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.140067 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATCG CGATCGTAAC CTTCCAGGGC TTCAACGAGC TCGACTCCCT CATTGCGCTC 
GGCGTGCTCA ATCGAATCAG GAAGCCCGGC TGGCGCGTCA CCCTTGCTTG CCCGGAGCCT
TCCGTCACGT CGATGAACGG GATAACCGTA CACGCGCAAT CGACGTTGGC GGACGCCTGC
ACGGCCGATG CCGTCATCAT CGGCAGCGGT ATTCAAACGC GGGACGTCGT CAACGACGCG
GCACTGATGG CGCAGCTCAG GTTCGACCCT GCCCGGCAGC TGATCGGCGC GCAATGTTCG
GGCACGTTGA TTCTGGCGAA GCTCGGGTTG CTCGGCACGA TCCCGGCCTG CACCGATCTC
ACGACCAAAC CCTGGGTGAT CGAGGCTGGC GTCGACGTCC TGAATCAACC CTTCTTCGCT
CGAGGTAACG TCGCCACGGC GGGCGGCTGC CTTGCTTCGC CGTATCTGGC CGCGTGGCTC
ATTGCACGTC TCGAAGGGGA GGACGCCGCG CGGGGCGCGC TGCACTATGT CGCGCCGGTC
GGGGAGAAGG ACGAGTATGT TTCCCGCGCG CTGACGAACA TCAAGCCCTA CTTGCGGTAG
 
Protein sequence
MHIAIVTFQG FNELDSLIAL GVLNRIRKPG WRVTLACPEP SVTSMNGITV HAQSTLADAC 
TADAVIIGSG IQTRDVVNDA ALMAQLRFDP ARQLIGAQCS GTLILAKLGL LGTIPACTDL
TTKPWVIEAG VDVLNQPFFA RGNVATAGGC LASPYLAAWL IARLEGEDAA RGALHYVAPV
GEKDEYVSRA LTNIKPYLR