Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5950 |
Symbol | |
ID | 4454507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | - |
Start bp | 84559 |
End bp | 85158 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639698011 |
Product | ThiJ/PfpI domain-containing protein |
Protein accession | YP_839576 |
Protein GI | 116686329 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.140067 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACATCG CGATCGTAAC CTTCCAGGGC TTCAACGAGC TCGACTCCCT CATTGCGCTC GGCGTGCTCA ATCGAATCAG GAAGCCCGGC TGGCGCGTCA CCCTTGCTTG CCCGGAGCCT TCCGTCACGT CGATGAACGG GATAACCGTA CACGCGCAAT CGACGTTGGC GGACGCCTGC ACGGCCGATG CCGTCATCAT CGGCAGCGGT ATTCAAACGC GGGACGTCGT CAACGACGCG GCACTGATGG CGCAGCTCAG GTTCGACCCT GCCCGGCAGC TGATCGGCGC GCAATGTTCG GGCACGTTGA TTCTGGCGAA GCTCGGGTTG CTCGGCACGA TCCCGGCCTG CACCGATCTC ACGACCAAAC CCTGGGTGAT CGAGGCTGGC GTCGACGTCC TGAATCAACC CTTCTTCGCT CGAGGTAACG TCGCCACGGC GGGCGGCTGC CTTGCTTCGC CGTATCTGGC CGCGTGGCTC ATTGCACGTC TCGAAGGGGA GGACGCCGCG CGGGGCGCGC TGCACTATGT CGCGCCGGTC GGGGAGAAGG ACGAGTATGT TTCCCGCGCG CTGACGAACA TCAAGCCCTA CTTGCGGTAG
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Protein sequence | MHIAIVTFQG FNELDSLIAL GVLNRIRKPG WRVTLACPEP SVTSMNGITV HAQSTLADAC TADAVIIGSG IQTRDVVNDA ALMAQLRFDP ARQLIGAQCS GTLILAKLGL LGTIPACTDL TTKPWVIEAG VDVLNQPFFA RGNVATAGGC LASPYLAAWL IARLEGEDAA RGALHYVAPV GEKDEYVSRA LTNIKPYLR
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