| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5943 |
|---|
| Symbol | |
|---|
| ID | 4454500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008544 |
|---|
| Strand | - |
|---|
| Start bp | 77983 |
|---|
| End bp | 78645 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639698004 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_839569 |
|---|
| Protein GI | 116686322 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1802] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.441915 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCGA AAGTCTCGAC AGATGCAGAG CTTGCCTACG AGGAGATCCG AGCGAGGATC
TTTGACGGCC GCTTTGCGCC CGGGCAGAAA GTATCCCACC GGGGCCTGTC CGACGAACTC
GGCTTCGGCC AAATGCCCGT GCGCAGCGCA TTGCATTTGC TCGAATCCGA AGGGTTGGTC
GTCGTCATCG AAAAGAGTGG CACCTATGTT GCGTCGCCGA CTACCAGCGA TCTCCGCGAA
ATTTTCGAAA TGCGGCTGGC CCTGGAGAGT ACCGCGGCGT TTCTTGCAGC GAGGTCGGGC
GTGACGGCAG GCCTTCGCGA CGCGGCAGCA AAAATGCAGG AACTGCTTGA CCGGGACGTC
GCGGACATCA TGCTCGAGCA ACGTATCGGC TGGGTGTTTC ATCAGGAGTT GTTCGCCGCC
GCACGGAACG TGCGTATCTC ATCGGCGTAT GGTCTATTGC GAGCCCAGAC CCTGGCCCTG
AACGAACTCC CGCGTGGCGA CGCTGAAACC GTTCGGCGCG GCACGATCGA ACACCTGCAC
ATCTTTCACG CAATCGAAGC GAACGACGGC GAGCTGGCGC GTCAGCATAT GTGGAATCAC
ATCGTTGACG GTACGCCGGC ACGGATCAAA CTGCTAAAGG CACGGCATGA ACACGAAAAA
TAA
|
|---|
| Protein sequence | MTSKVSTDAE LAYEEIRARI FDGRFAPGQK VSHRGLSDEL GFGQMPVRSA LHLLESEGLV
VVIEKSGTYV ASPTTSDLRE IFEMRLALES TAAFLAARSG VTAGLRDAAA KMQELLDRDV
ADIMLEQRIG WVFHQELFAA ARNVRISSAY GLLRAQTLAL NELPRGDAET VRRGTIEHLH
IFHAIEANDG ELARQHMWNH IVDGTPARIK LLKARHEHEK
|
|---|
| |