Gene Bcen2424_5942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5942 
Symbol 
ID4454499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp76761 
End bp77966 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content64% 
IMG OID639698003 
Productsodium:dicarboxylate symporter 
Protein accessionYP_839568 
Protein GI116686321 
COG category[C] Energy production and conversion 
COG ID[COG1301] Na+/H+-dicarboxylate symporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.482098 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATGC TTGGCGGGCT TGTCCTGGGC GCCGCTTGCG GCGTATTTGC TCCAGGCTTT 
GCCGCGAAGC TGGGCTTTCT GAGCGCGATG TTCGGCCACG CGATCAAGAT GGTCGTCATG
CCGCTGATTT TCCTGTCGGT CACGGTCGGG GTCTTTCGTG CGGGCCGGCT TCGCGAGCGG
CTCGGCAAGG TCGCACTGTC GAGTATCGGC TTCTTCGTGT TGATGACGGG TCTGGCCGCC
TCGCTTGGCC TGCTGCTCAA CTTTGCATTT CGACCGGGTC TCGGGGCGAG CATGGTTCAG
TCCGGATCGA TGCCCGCCGC GCTTGCGTCC AGTATCGACT GGACGAAATT CCTCGTCGAT
CTGATCCCCG CCAACATCGT CGCTGCGCTC GCCGCGGGGA ATTCGCTCCC CGTGCTGGTT
TTCGGGGTGA TTTTCGGGGC GGCCCTGGCG GCCGCGCCGG AGCGTGCCGA GCCCGCGATT
GCCGTTTTCG AGGCGCTGCT GTCGGGACTG TTCAAGATGG TCCAGTGGGT GATCGCATGG
TCGCCGCTCG CGATCTTTGC CGCGATCGCG CAGCTGTTGT CGGCCAAGGG GTTCACCGGC
GCGCACTCGC TTGTCGAGCT TCTGGGCGTC GCCTATCTCG GCATGGCGAT TCTGGCGGTC
GTCCTCACCA TCGTCATTCG CGTCGCCGGT CAGTCGCCGC TCGCCGTTCT CAGGAAGGTG
AAGGAGCCGC TGATCCTGGG TTTCACGACG CGTTCGTCCG AAATTACCTA CCCGTTGCAC
CTGAAGAAGC TGGTTGAATT GGGCGTGCCC TACGGCGTGG CGTCCACGAT CTTGCCGCTG
GCCTACATTT TCAATCGCGA CGGCGCGGTA CTTTACACGG CCCTTGCGGT CGGCTACCTG
GCCGATGCCT ATCATCTCGT CTGGTCCTGG CCGCTGGTGA TCACGATCCT GATCTTGACG
ATCATCACCA TCGACGGCGC GGCCAATGTG CCCTCCGGGG CGATCGTCGC CATCACCATC
GTTCTCACGT CGATCGGGTT GCCGGCCGAT GCGGTGCTGC TGCTGCTGGG CGTCGATGCC
TTTTTCGACA TGGGGCGGAC CGCCCTGAAC GTCTACGGGA GCACGGCCGC CGCCGCAGTT
GCGGTGAGGC TGTCCGGTTC AGACAGTATC GCCGCGGAAA CCGTACCCCG GCAGGCAAGC
GTGTAG
 
Protein sequence
MQMLGGLVLG AACGVFAPGF AAKLGFLSAM FGHAIKMVVM PLIFLSVTVG VFRAGRLRER 
LGKVALSSIG FFVLMTGLAA SLGLLLNFAF RPGLGASMVQ SGSMPAALAS SIDWTKFLVD
LIPANIVAAL AAGNSLPVLV FGVIFGAALA AAPERAEPAI AVFEALLSGL FKMVQWVIAW
SPLAIFAAIA QLLSAKGFTG AHSLVELLGV AYLGMAILAV VLTIVIRVAG QSPLAVLRKV
KEPLILGFTT RSSEITYPLH LKKLVELGVP YGVASTILPL AYIFNRDGAV LYTALAVGYL
ADAYHLVWSW PLVITILILT IITIDGAANV PSGAIVAITI VLTSIGLPAD AVLLLLGVDA
FFDMGRTALN VYGSTAAAAV AVRLSGSDSI AAETVPRQAS V