Gene Bcen2424_5925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5925 
Symbol 
ID4454637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp59825 
End bp60580 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content69% 
IMG OID639697986 
Producthypothetical protein 
Protein accessionYP_839551 
Protein GI116686304 
COG category[S] Function unknown 
COG ID[COG3665] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03425] urea carboxylase-associated protein 2 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.278629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCGA GCCCCCAAGC CATTCTTGCC CCGCCGCCGC ACGTCGCGTG GGAAACGCTG 
ATTCCCGCCG GAACCCACTG GTCCGGCATC CTGCGCCGCG GCCTCGCGCT GCGCATCGTC
GACGTCGACG GCGGCGCGAA CCTGTCCGCT GTCTTTCATC GCCAGGAAGA CCTGCTCGAA
CGCTACAACA TGGCCGACAC GCTGAAGGCG CAGCACACCG CGCATCTGAC GCGCGGCCAT
GCGCTGTATA CGGACATGGG CCGCGTGATC GCGTCGATCA CGGCCGACAC GCTCGGCTGG
CACGACCCGC TCGGCGGCGT CGGCGATGCG CGGCTGTTCG CGCACAAGTA CGGCACGTCG
TCGTACCAGG CCGATCGCAA CGCAATGATC CGCAACGGCC GCGACAGCCT CGTGCTCGAA
CTCGCCAAAT ACGGACTGTC GGCGCGCGAC CTCGCCGCGA ACGTCAACTT CTTCAGCAAG
CTGGATGCAC GCGACGACGG CGCGCTCGAG TTCGTCGCCG GACATTCGCC GGCCGGCAGC
GCGTTCGACC TGCGCTTCGA GATGAACACG CTCGCGGCGT TCTCGACCGC GCCGCATCCG
CTCGATCCGC GCCCGGACTA TGCGCCGAAA GCCGTGAAGC TGATCGCGTA CCGCGCGTAT
CCGGCCGACG GCGCGGCGCC CGACGACGAC CCGTGCCGGC GCGCATGCGC GGAGAACATG
CGCGGCTTCG CCAACACCGA CCGTCTGTTC GCATGA
 
Protein sequence
MSPSPQAILA PPPHVAWETL IPAGTHWSGI LRRGLALRIV DVDGGANLSA VFHRQEDLLE 
RYNMADTLKA QHTAHLTRGH ALYTDMGRVI ASITADTLGW HDPLGGVGDA RLFAHKYGTS
SYQADRNAMI RNGRDSLVLE LAKYGLSARD LAANVNFFSK LDARDDGALE FVAGHSPAGS
AFDLRFEMNT LAAFSTAPHP LDPRPDYAPK AVKLIAYRAY PADGAAPDDD PCRRACAENM
RGFANTDRLF A