Gene Bcen2424_5919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5919 
Symbol 
ID4454631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp50634 
End bp51371 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content66% 
IMG OID639697980 
Productextracellular solute-binding protein 
Protein accessionYP_839545 
Protein GI116686298 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTAA CCATTGCGTA CATCGAGGAA CCTCCGTTTG GATGGACCGA AGCGGATGGC 
ACCGCGAGAG GTGCCGATCT CGAGCTCGCG GCGACGATCC TCCGGCAGAT AGGCGTCACC
CGCGTCGAGT ATTGCCCGAC GACGTTCAGC GAATTGCTGC CCGGCGTCGC ATCGGGGCAC
TGGGACATGA ACGTGCCGCT CTTCGTGACA CCGCAGCGGG CCCATACCGT TGCGTTCAGC
GTGCCGGTGT GGGGAATCGA GGACGGTTTC CTGGTGCGGC CCGGCAACCC GAAGGCGCTC
AGGCGTTATG CGTCGATCGC CGAACGTCCC GATGCGCGCC TCGGCATCAT CGCCGGACAG
GTACAGCATG ATTCCGCGAT GGCGGCAGGC GTGAGCCGGC GGCAAATCGT CGTCTTCGAA
CAGCAAGCCG ACGCGATCGC GGCCGTGCTC TCCGGCGTGA TCGACGCCTA TGCGAGCACC
GCTTTGGGGA ATCGCATCGT GGCGGGCCGC ATAGGCAGCG CGATGATCGA GGCCGTCGCG
CACGAGCCGG ATGGCGACGG CAGCCAGCGG ACGCCTCCGC TGGGCGCGTT TTCATTCAAC
CGGGAAAACC GGGATCTCCT GACGGCGTTC AATCGGCAAC TGCGCGCGTA TGTCGGCTCG
CCGGACCATC GCGCGCGCAT GGCGAGATTC GGGCTGACCG ATCGCGAGAT CGATCCAGCC
GTCTCGCCGA CAGGATAG
 
Protein sequence
MKVTIAYIEE PPFGWTEADG TARGADLELA ATILRQIGVT RVEYCPTTFS ELLPGVASGH 
WDMNVPLFVT PQRAHTVAFS VPVWGIEDGF LVRPGNPKAL RRYASIAERP DARLGIIAGQ
VQHDSAMAAG VSRRQIVVFE QQADAIAAVL SGVIDAYAST ALGNRIVAGR IGSAMIEAVA
HEPDGDGSQR TPPLGAFSFN RENRDLLTAF NRQLRAYVGS PDHRARMARF GLTDREIDPA
VSPTG