Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5919 |
Symbol | |
ID | 4454631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | - |
Start bp | 50634 |
End bp | 51371 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639697980 |
Product | extracellular solute-binding protein |
Protein accession | YP_839545 |
Protein GI | 116686298 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTAA CCATTGCGTA CATCGAGGAA CCTCCGTTTG GATGGACCGA AGCGGATGGC ACCGCGAGAG GTGCCGATCT CGAGCTCGCG GCGACGATCC TCCGGCAGAT AGGCGTCACC CGCGTCGAGT ATTGCCCGAC GACGTTCAGC GAATTGCTGC CCGGCGTCGC ATCGGGGCAC TGGGACATGA ACGTGCCGCT CTTCGTGACA CCGCAGCGGG CCCATACCGT TGCGTTCAGC GTGCCGGTGT GGGGAATCGA GGACGGTTTC CTGGTGCGGC CCGGCAACCC GAAGGCGCTC AGGCGTTATG CGTCGATCGC CGAACGTCCC GATGCGCGCC TCGGCATCAT CGCCGGACAG GTACAGCATG ATTCCGCGAT GGCGGCAGGC GTGAGCCGGC GGCAAATCGT CGTCTTCGAA CAGCAAGCCG ACGCGATCGC GGCCGTGCTC TCCGGCGTGA TCGACGCCTA TGCGAGCACC GCTTTGGGGA ATCGCATCGT GGCGGGCCGC ATAGGCAGCG CGATGATCGA GGCCGTCGCG CACGAGCCGG ATGGCGACGG CAGCCAGCGG ACGCCTCCGC TGGGCGCGTT TTCATTCAAC CGGGAAAACC GGGATCTCCT GACGGCGTTC AATCGGCAAC TGCGCGCGTA TGTCGGCTCG CCGGACCATC GCGCGCGCAT GGCGAGATTC GGGCTGACCG ATCGCGAGAT CGATCCAGCC GTCTCGCCGA CAGGATAG
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Protein sequence | MKVTIAYIEE PPFGWTEADG TARGADLELA ATILRQIGVT RVEYCPTTFS ELLPGVASGH WDMNVPLFVT PQRAHTVAFS VPVWGIEDGF LVRPGNPKAL RRYASIAERP DARLGIIAGQ VQHDSAMAAG VSRRQIVVFE QQADAIAAVL SGVIDAYAST ALGNRIVAGR IGSAMIEAVA HEPDGDGSQR TPPLGAFSFN RENRDLLTAF NRQLRAYVGS PDHRARMARF GLTDREIDPA VSPTG
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