| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5916 |
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| Symbol | |
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| ID | 4454628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008544 |
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| Strand | - |
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| Start bp | 48274 |
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| End bp | 49038 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639697977 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_839542 |
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| Protein GI | 116686295 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGCA AGCTCGACAA CAAGATCGCA CTCGTCACCG GCGCCACCAG CGGCATCGGC
CTGGCCACCG CCCAACGCTT CGCCGCTGAA GGGGCGCACG TCTATCTCAC GGGCCGCCGT
CAGGCCGAAC TCGATGCCGC CGTGGCGGGT ATCCGTGAAG CCGGCGGCAC GGCCACCGGC
GTGCGTTCCG ATTCCACGAA GCTCGATGAG CTCGACGCGC TGTATGCGCA AATCAAGGAA
GAACAGGGGC GCCTGGACGT GCTATTCGTG AACGCCGGCG GCGGTTCGAT GCTGCCGCTG
GGCAGCATCA CCGAAGCGCA CTACGACGAC ACCTTCGACC GCAACGTGAA GGGCGTGCTG
TTCACCGTGC AGAAGGCGCT GCCGCTGCTG GCCGATGGCG CATCGGTGAT CCTGACCGGC
TCGACGGCGG GTAGCGCGGG CACCGCTGCG TTCAGCGTGT ATTCGGCTTC GAAGGCGGCG
GTGCGTGCGT TTGCGCGTAG CTGGATTCTC GACCTCAAGG ACCGACGCAT CCGCGTGAAC
ACGATCAGCC CGGGCGCGAC CCGCACGCCC GGCCTGCTCG ATCTCGCCGG CGACGATGCG
GGTCAGCGGC AGGGGCTTGC CGATTATCTG GCGGCGCAGA TTCCGATGGG GCGCCTCGGC
GAGCCGGGCG AGATTGCGGG CGCGGCGCTG TTCCTGGCGT CGGACGACGC GAGCTTCGTG
AACGGCATCG AATTGTTCGT CGATGGCGGC CAGCAGCAGA TCTGA
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| Protein sequence | MARKLDNKIA LVTGATSGIG LATAQRFAAE GAHVYLTGRR QAELDAAVAG IREAGGTATG
VRSDSTKLDE LDALYAQIKE EQGRLDVLFV NAGGGSMLPL GSITEAHYDD TFDRNVKGVL
FTVQKALPLL ADGASVILTG STAGSAGTAA FSVYSASKAA VRAFARSWIL DLKDRRIRVN
TISPGATRTP GLLDLAGDDA GQRQGLADYL AAQIPMGRLG EPGEIAGAAL FLASDDASFV
NGIELFVDGG QQQI
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