Gene Bcen2424_5899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5899 
Symbol 
ID4454611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp30565 
End bp31467 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content67% 
IMG OID639697960 
Product6-phosphogluconate dehydrogenase, NAD-binding 
Protein accessionYP_839525 
Protein GI116686278 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.702285 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGC AGATTGGCCT GATCGGCGTG GGTTTGATGG GGCATGGTAT TGCGCGCAAC 
GTGCTGAAGC ACGGTTATCC GCTCACGGTC GTCGAGCATC CGGGCAATCA GCCGCTCGAC
GAGCTGCTGC GCGACGGCGT ACGGACCGTG CGGACCGCGC GCGAACTGGC TGCGCAAGCG
GACGTCATCA TCCTGTGCGT GACGGGGTCC CCCGAAGTGG AAGCGGTGCT CACAGGTGAC
GACGGCGTGT TGGCCGGCCT GAGGGACAAC GCGATCGTCG TCGATTGTTC GACCGCCGTT
CCCGAATCGA CCGTCAGAAT GGCGCGGCTC GTCGAAGCGG CAGGCGGGCG CTTCGTCGAC
GCGCCGATGA CGCGCGGCGC CAAGGAGGCG CACGAGGGCC GGCTGAACCT GCTGGTCGGT
GCGCCGCCCG GGTTGTTCGC GGAGATCAGG CCGGTGCTCG CGTGCTTCGC GGAAAACATC
ACGTGTGTCG GCGATGTCGG GGCCGGCCAC AGCATGAAGC TGCTGCACAA CTATGTTTCG
CTCGGGACCA TCGCGCTGCT GTCGGAAGCC GTCGCGTGCG CGAAGCGCTC GGGCGTGGAC
GTCGCGGTGC TGGCCGACGT GCTCGCCAAC GGCGGTGGCG GCGGCGCCGC GCTGAACCGG
CTGCGTCCGT TTCTGGAGAC CGGCGACACG TCCGCGCTGC CGTTCCATAT GGCGAACGCG
CTCAAGGACC TGTCGTACTA CTCGGCGATG GCGGAAGGTG TCGACGCGGC TCATGGGATC
GCGGCGGCTG TTACGGAGAC GTATCGTGAT GCCGTTGCGG GCGCGGGAGC GCATTGTCCG
GTGTTGAAGT TGTCGGATGT GCTGATGGTG GGGGGCGTGG GCGACGAGGG TACGTCGCGT
TGA
 
Protein sequence
MKQQIGLIGV GLMGHGIARN VLKHGYPLTV VEHPGNQPLD ELLRDGVRTV RTARELAAQA 
DVIILCVTGS PEVEAVLTGD DGVLAGLRDN AIVVDCSTAV PESTVRMARL VEAAGGRFVD
APMTRGAKEA HEGRLNLLVG APPGLFAEIR PVLACFAENI TCVGDVGAGH SMKLLHNYVS
LGTIALLSEA VACAKRSGVD VAVLADVLAN GGGGGAALNR LRPFLETGDT SALPFHMANA
LKDLSYYSAM AEGVDAAHGI AAAVTETYRD AVAGAGAHCP VLKLSDVLMV GGVGDEGTSR