Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5895 |
Symbol | |
ID | 4454607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008544 |
Strand | + |
Start bp | 25874 |
End bp | 27094 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639697956 |
Product | Formyl-CoA transferase |
Protein accession | YP_839521 |
Protein GI | 116686274 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.191567 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGCAC GTCCCCTCGA AGGCATTCGC GTCGTCGACT ACAGCCATTT CCTCGCCGGC CCGTATGTCG GACGCTGTCT CGCGGCGCTC GGCGCCGAAG TGATCAAGGT CGAGCGCCCG GGCGCCGGCG ACGCCGGACG CCAGCACGCG ACCGTGCTCG ACGACCAGCA AAGCGGCTAC TTCCTGCAGC TCAACATGGG CAAGCGCGGC GTGAGCGTGA ACATGAAGGA CGCGCGCGGC AAGGCGTTCA TGCAGCGGCT GTGCGACTCC GCCGACGTCT TCATCGAGAA CTATCGGCCG GGCGCGCTGG ACAAGCTCGG GCTCGGCTAT GAAGAACTGT CGGCGCGCAA TCCGGGCCTC GTCTACTGCT CGATTTCGGC GTACGGTCAC ACTGGTCCCG ACGCACATCG TGCCGGCTTC GGGCTGATCG CCGAAGCGAA GAGCGGGATC ATGCAGATGG TCGGCACGCC CGGCGAGCGG CCGCCGCTGC TCCGCATATC GCTCGGCGAC ATGTACACCG GCATTCATGC GGTCGCGGCG ATCAACGCCG CGCTGCTGGG GCGCGTGAAG AGCGGCCGCG GGCAACACGT CGACATGGCG CTGTACGACA CGCTGGTGTC GATGCACGAA TATGCGGTGC AGTGCTACAC GCTGAAGGGC GTGCTGCCCG AGCAGACCGG TCACGACATG CCGACCTCGA CACTCTATGG CGTGTTCCGT GCCGCCGATG GCGATCTCGT GATCGCCGCG CAAGTCGACG ACGCGTGGAA GCGCTTTGCA CAACTGATCG AAGCGCACGG CGGCCCGGCT GGCTTCGGTG CGGACTCCCG GTTTCACGAC AGCACCGGGC GCAATGCGCA TCGCGCGGCG ATCCTGTCGG TGGTCGAACC GTGGGTGGCC GCGCGTTCCG TCGCGTCGGT ACTGGACCTG CTGGACGGCA TCGACGTTCC GTGCGCGAAG GTGCAGCGCA TCGACGAGGT GTTGAACGAT CCGCAGATCC AGGCCCGAGG CATGGTCGTC GAGCAGCAGC ATCCACGCTA CGGCACGCTG CGCCTGCCCA ACCTGCCGTT CCGGTTTTCC GATTGCGATA CGACGATTCG CGAGGTCGCG CCCGATCTCG GCCAGCACAA CGCGGAAGTC GCACGGTCCC TCGGGTTCGA TGCGGCCGAA ATCGACGCGA TGCAGGCCGA CGGCGTCCTC TATTCAAAAG TGAGCCAATG A
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Protein sequence | MQARPLEGIR VVDYSHFLAG PYVGRCLAAL GAEVIKVERP GAGDAGRQHA TVLDDQQSGY FLQLNMGKRG VSVNMKDARG KAFMQRLCDS ADVFIENYRP GALDKLGLGY EELSARNPGL VYCSISAYGH TGPDAHRAGF GLIAEAKSGI MQMVGTPGER PPLLRISLGD MYTGIHAVAA INAALLGRVK SGRGQHVDMA LYDTLVSMHE YAVQCYTLKG VLPEQTGHDM PTSTLYGVFR AADGDLVIAA QVDDAWKRFA QLIEAHGGPA GFGADSRFHD STGRNAHRAA ILSVVEPWVA ARSVASVLDL LDGIDVPCAK VQRIDEVLND PQIQARGMVV EQQHPRYGTL RLPNLPFRFS DCDTTIREVA PDLGQHNAEV ARSLGFDAAE IDAMQADGVL YSKVSQ
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