Gene Bcen2424_5895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5895 
Symbol 
ID4454607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp25874 
End bp27094 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content66% 
IMG OID639697956 
ProductFormyl-CoA transferase 
Protein accessionYP_839521 
Protein GI116686274 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.191567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCAC GTCCCCTCGA AGGCATTCGC GTCGTCGACT ACAGCCATTT CCTCGCCGGC 
CCGTATGTCG GACGCTGTCT CGCGGCGCTC GGCGCCGAAG TGATCAAGGT CGAGCGCCCG
GGCGCCGGCG ACGCCGGACG CCAGCACGCG ACCGTGCTCG ACGACCAGCA AAGCGGCTAC
TTCCTGCAGC TCAACATGGG CAAGCGCGGC GTGAGCGTGA ACATGAAGGA CGCGCGCGGC
AAGGCGTTCA TGCAGCGGCT GTGCGACTCC GCCGACGTCT TCATCGAGAA CTATCGGCCG
GGCGCGCTGG ACAAGCTCGG GCTCGGCTAT GAAGAACTGT CGGCGCGCAA TCCGGGCCTC
GTCTACTGCT CGATTTCGGC GTACGGTCAC ACTGGTCCCG ACGCACATCG TGCCGGCTTC
GGGCTGATCG CCGAAGCGAA GAGCGGGATC ATGCAGATGG TCGGCACGCC CGGCGAGCGG
CCGCCGCTGC TCCGCATATC GCTCGGCGAC ATGTACACCG GCATTCATGC GGTCGCGGCG
ATCAACGCCG CGCTGCTGGG GCGCGTGAAG AGCGGCCGCG GGCAACACGT CGACATGGCG
CTGTACGACA CGCTGGTGTC GATGCACGAA TATGCGGTGC AGTGCTACAC GCTGAAGGGC
GTGCTGCCCG AGCAGACCGG TCACGACATG CCGACCTCGA CACTCTATGG CGTGTTCCGT
GCCGCCGATG GCGATCTCGT GATCGCCGCG CAAGTCGACG ACGCGTGGAA GCGCTTTGCA
CAACTGATCG AAGCGCACGG CGGCCCGGCT GGCTTCGGTG CGGACTCCCG GTTTCACGAC
AGCACCGGGC GCAATGCGCA TCGCGCGGCG ATCCTGTCGG TGGTCGAACC GTGGGTGGCC
GCGCGTTCCG TCGCGTCGGT ACTGGACCTG CTGGACGGCA TCGACGTTCC GTGCGCGAAG
GTGCAGCGCA TCGACGAGGT GTTGAACGAT CCGCAGATCC AGGCCCGAGG CATGGTCGTC
GAGCAGCAGC ATCCACGCTA CGGCACGCTG CGCCTGCCCA ACCTGCCGTT CCGGTTTTCC
GATTGCGATA CGACGATTCG CGAGGTCGCG CCCGATCTCG GCCAGCACAA CGCGGAAGTC
GCACGGTCCC TCGGGTTCGA TGCGGCCGAA ATCGACGCGA TGCAGGCCGA CGGCGTCCTC
TATTCAAAAG TGAGCCAATG A
 
Protein sequence
MQARPLEGIR VVDYSHFLAG PYVGRCLAAL GAEVIKVERP GAGDAGRQHA TVLDDQQSGY 
FLQLNMGKRG VSVNMKDARG KAFMQRLCDS ADVFIENYRP GALDKLGLGY EELSARNPGL
VYCSISAYGH TGPDAHRAGF GLIAEAKSGI MQMVGTPGER PPLLRISLGD MYTGIHAVAA
INAALLGRVK SGRGQHVDMA LYDTLVSMHE YAVQCYTLKG VLPEQTGHDM PTSTLYGVFR
AADGDLVIAA QVDDAWKRFA QLIEAHGGPA GFGADSRFHD STGRNAHRAA ILSVVEPWVA
ARSVASVLDL LDGIDVPCAK VQRIDEVLND PQIQARGMVV EQQHPRYGTL RLPNLPFRFS
DCDTTIREVA PDLGQHNAEV ARSLGFDAAE IDAMQADGVL YSKVSQ