Gene Bcen2424_5878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5878 
Symbol 
ID4454590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008544 
Strand
Start bp9720 
End bp11171 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content72% 
IMG OID639697939 
Productmajor facilitator transporter 
Protein accessionYP_839504 
Protein GI116686257 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.307584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACC GTGCCCCGAC GCTCGACCGC ATCGACCGCG GCGACCACAT GCCGACCGCC 
GCCGCTGATT CACGCCGCAC GTCGCTGCGC GCGATCTTCC CGACCGTCGC GGCCGCGAGC
CTCGGCTTCG CGATCGTCCA GCTCGACGTG ACCGTCGTCA ACGTCGCGAT TCCGAGCCTC
GGCCACGCGT TCGGATCGAG CATCCACGGG CTGCAGTGGA TCGTCGATGC GTACACGCTG
TCGTTCGCCG CGCTGCTGCT GACCTCCGGC ACGCTGGCCG ACCGCTTCGG CAGCCGCCGG
CTGTTCGCGT ACGGCCTTGC GCTGTTCCTG CTCGCGTCGC TCGGTTGCGC GCTCGCGCCG
TCGCTGGTCA CGCTGGTCGC CGCGCGGGTC GCGCAGGGCG TCGGCGCCGC GATGATCCTG
CCCACGTCGC TCGCGCTCAT CACCCATGCC TGCGCCAACG ATGCCGCCGC CCGCGTGCGA
GCCGTCGCGT GGTGGAGCGC GACGGGCGGC GCGATCAGCG CGGCCGGGCC GACGCTCGGC
GGCCTGCTGA TCGATTCGCT CGGCTGGCGC GCGATCTTCT TCATCAACCT GCCGATCTGC
GCGCTCGGAC TGTGGCTCAC GCTGCGCCAC GTGCGGGATT CGGCCGCCGC GCGCACGCGG
CTGTTCGATC CGGCCGGCCA GTTCGTCGCG GTGCTCGTGC TCGGGCTGCT GACGGGCGGG
ATCATCCGGG CCGGCGCGCA TGGGTTGGGT GACCCGTATG CGGCCGGCGC GCTGATCGCG
TCAGCCGTAC TCGGCGTGTT GTTCGTCGCG ATCGAACGGC GCGTGGCCGC GCCGATGCTG
CAGCTCGCGT TGTTCCGGCT CCCGCGCGTG CCGGGCGTGC TCGCGATCGG CGCGGTCACG
AATGCGGCGT TCTACGGGCT GATCTTCTCG CTCAGCGTCT ATTTCCAGAA CGCGTGCGGC
TTCACGGCGA CCGAATCGGG GCTCGCGCTC GCGCCGCTCA CGATCATCAT GCTCGCCAAC
ATCGCAAGCG CGCGGCTCGC GGTCCGCTAC GGCTTCCGCG CGACCGTCAT CATCGGCCTC
GCCGTCTCGC TCGCCGGCTA CGTGTGGCTG TGGCAAACGC TCGCCGCGCA CACACCGTAC
CTGCTGTTGG CGCCCGGGCT CGCGGCGATG GCGATCGGCG GCGGCATCGC GATTCCCGCG
CTGACGTCGA CGATGCTCGG CAGCGTCGAG GCCGGCCGTT CGGGCACCGC GTCCGCGATC
CTCAATACCG CGCGCCAGGT GGGCGCCGCG ATCGGCGTCG CGGCACTCGG CGCGCTGGTC
GCCGGCCAGG GCGCGGCAAT CGTGGCCGGT GCGGCACGTG CGTTTGTCAT CGCGGCCGTG
CTCGTCGCGA TCTGTGTCGT GCTGGCGGTA CGCTGGCCCC GCGACGCATC CGCTACCGGC
ACGCGGGCCT GA
 
Protein sequence
MSDRAPTLDR IDRGDHMPTA AADSRRTSLR AIFPTVAAAS LGFAIVQLDV TVVNVAIPSL 
GHAFGSSIHG LQWIVDAYTL SFAALLLTSG TLADRFGSRR LFAYGLALFL LASLGCALAP
SLVTLVAARV AQGVGAAMIL PTSLALITHA CANDAAARVR AVAWWSATGG AISAAGPTLG
GLLIDSLGWR AIFFINLPIC ALGLWLTLRH VRDSAAARTR LFDPAGQFVA VLVLGLLTGG
IIRAGAHGLG DPYAAGALIA SAVLGVLFVA IERRVAAPML QLALFRLPRV PGVLAIGAVT
NAAFYGLIFS LSVYFQNACG FTATESGLAL APLTIIMLAN IASARLAVRY GFRATVIIGL
AVSLAGYVWL WQTLAAHTPY LLLAPGLAAM AIGGGIAIPA LTSTMLGSVE AGRSGTASAI
LNTARQVGAA IGVAALGALV AGQGAAIVAG AARAFVIAAV LVAICVVLAV RWPRDASATG
TRA