Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5848 |
Symbol | |
ID | 4452736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 2978513 |
End bp | 2980897 |
Gene Length | 2385 bp |
Protein Length | 794 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639697909 |
Product | DNA polymerase II |
Protein accession | YP_839474 |
Protein GI | 116693941 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.595461 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGACGGCGT TCGAGCAGGG CTTCATCCTT ACCCGCCACT GGCGGGACAC CGCATCCGGC ATCGAGATCG AGTTCTGGCT GGCAACCGAA CACGGTCCGC GCCGCGTGCG GTTGCGCCCG CAGGAAGCCG TCGCGTTCAT CCCGGCCGAA CAGCAGGCAC TCGCCGAACG CGCACTGGCC GGCGAGCGCG AAGCCGAATT GCGGCCGCTC GCGCTGCGCG ACTTCCGGCA ACGCCCGGTC GTCGGCCTCT ATTGCAAGCG CTACCGGCAT CTGTCCGGGC TCCAGAAGCG GCTCGCCGCC GCCGGCGTCG ACGTCTACGA AGCCGACGTG CAGCCGCCCG ACCGCTACGC AATGGAGCGC TTCATCACCG CATGCGTGGC GTTTCGCGGC CAGCCCGGCC GCGACGGCAC GCTCACCGGC GGCGAGCTGA AGCCCGCAAC CGGTTACCGC CCTGCGCTAC GCTGCGTGTC GCTCGACATC GAAACCAGCG TCCACGGCGA GTTGTACTCG ATCGCGCTCG AAGGCTGCGG ACAGCGCCAG GTCTACATGC TCGGGCCACC GAACGGCGGC GCGAGCGGCA GCGCAGGCAC CCTCGACTTC GACCTCGACT ACTGCGACAG CCGCCCCGCG ATGCTCGCGC GGCTCAACGA CTGGTTCGAC CGGCACGATC CCGATGCGGT GATCGGCTGG AATCTCGTGC AGTTCGACCT GCGCATCCTG CATGCGCACG CGGAGCAATA CGGCATCCCG CTGAAGCTCG GGCGCGGCGG CAGCGCGCTC GACTGGCGCG CGCACGGCCA GCAGCCCGAC CACTTCTTCG CGGGCGCGGC CGGCCGGCTG ATCCTCGACG GCATCGACAT GCTGAAATCC GCGACGTGGA CCTTCCCGTC GTTCAGCCTC GAATACGTGT CGCAGTCGCT GCTCGGCGAA GGCAAGTCGA TCGACAACCC GTACCAGCGG ATGGACGAGA TCCAGCGCCG CTTCGAGCAC GACAAGCCCG CGCTCGCGCG CTACAACCTG AAGGACTGCG AACTCGTCAC GCGCATCTTC GACAAGGCCG ACCTGCTGTC CTTCGCGCTG GAACGCGCGA GCGTCACGGG CCTCGCGGCC GATCGCACCG GCGGCTCGGT CGCGGCGTTC ACGCACCTGT ACCTGCCGCG CATGCACCGG CTCGGCTATG TCGCCCCGAA CCTCGGCGAC GTGACGGGTC AGAACAGCCC CGGCGGCTTC GTGATGGATT CGCGGCCCGG GCTGTACGAC TCGGTGCTCG TGTTCGACTA CAAGAGCCTC TATCCGTCAA TCATCCGCAC GTTCCTGATC GACCCGGTCG GCCTGATCGA GGGGCTCGCG AATCCTGGCG ACGATGCTTC GGTGCCCGGT TTTCTCGGTG CGCGCTTCTC GCGCACCGCG CACTGCCTGC CCGACATCGT GCGCCGCGTA TGGGAGGGCC GCGACGACGC GAAGCGGCAG CACAACGCGC CGCTGTCGCA GGCGCTGAAG ATCATCATGA ATTCGTTTTA CGGCGTGCTC GGCTCGACGG GCTGCCGCTT CTTCGACCCG CGCCTCGCGT CGTCGATCAC GATGCGCGGC CACGAGATCA TGCACCGCAC GCGCACACTG ATCGAAGCTC AGGGTTACGA AGTGATTTAC GGCGATACCG ATTCGACGTT CGTATGGCTC GGCCGCGCAC ATGACGACGA CGAAGCCGGC GCCAAGGGCC GCGCGCTCGT CGAGCACGTG AATCGCTGGT GGCACGTCCA CCTACGCGAA CAGTTCGGGC TCGACAGCGC GCTGGAGCTG CAATACGAGC GGCATTACCG CCGCTTCCTG ATGCCGACCG TGCGCGGCGC GGAAGAAGGC AGCAAGAAGC GCTATGCGGG GCTCGCGGCA ACGGCCGACG GCGGCGAGGA TCTCGTGTTC AAGGGGCTCG AAACGGTGCG CACCGACTGG ACGCCGCTCG CGCAGCAATT CCAGCGCGAG TTGTACCGGC GCGTGTTCAG GCGCGAACCG TACCAGGATT TCGTTCGCGA CTATGTGCGG CGCACGCTGG CCGGCGAATT CGACGACCAG CTCGTCTACC GCAAGCGCGT GCGCCGGCCG CTGCGCGAAT ACGAGCGCAA CGTGCCGCCG CACGTGCGCG CGGCACGCAT CGCCGACGAG TTCAATCACG CGCAGGGCCG GCCGCTGCAG TATCAGCGCG GCGGCTGGAT CAGCTACGTG ATGACGACGG CCGGCCCCGA GCCGCTCGAA ACGATGCGTT CGCCGATCGA CTATGCGTTC TATCTGAGCC GCCAGCTTCA GCCCGTCGCC GATGCGATCC TGCCGTTCCT GCGCGACGAT TTCGAACGCG TGATCTCCGG GCAGGGGCAG TTGTTCGGCG ATTGA
|
Protein sequence | MTAFEQGFIL TRHWRDTASG IEIEFWLATE HGPRRVRLRP QEAVAFIPAE QQALAERALA GEREAELRPL ALRDFRQRPV VGLYCKRYRH LSGLQKRLAA AGVDVYEADV QPPDRYAMER FITACVAFRG QPGRDGTLTG GELKPATGYR PALRCVSLDI ETSVHGELYS IALEGCGQRQ VYMLGPPNGG ASGSAGTLDF DLDYCDSRPA MLARLNDWFD RHDPDAVIGW NLVQFDLRIL HAHAEQYGIP LKLGRGGSAL DWRAHGQQPD HFFAGAAGRL ILDGIDMLKS ATWTFPSFSL EYVSQSLLGE GKSIDNPYQR MDEIQRRFEH DKPALARYNL KDCELVTRIF DKADLLSFAL ERASVTGLAA DRTGGSVAAF THLYLPRMHR LGYVAPNLGD VTGQNSPGGF VMDSRPGLYD SVLVFDYKSL YPSIIRTFLI DPVGLIEGLA NPGDDASVPG FLGARFSRTA HCLPDIVRRV WEGRDDAKRQ HNAPLSQALK IIMNSFYGVL GSTGCRFFDP RLASSITMRG HEIMHRTRTL IEAQGYEVIY GDTDSTFVWL GRAHDDDEAG AKGRALVEHV NRWWHVHLRE QFGLDSALEL QYERHYRRFL MPTVRGAEEG SKKRYAGLAA TADGGEDLVF KGLETVRTDW TPLAQQFQRE LYRRVFRREP YQDFVRDYVR RTLAGEFDDQ LVYRKRVRRP LREYERNVPP HVRAARIADE FNHAQGRPLQ YQRGGWISYV MTTAGPEPLE TMRSPIDYAF YLSRQLQPVA DAILPFLRDD FERVISGQGQ LFGD
|
| |