Gene Bcen2424_5835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5835 
Symbol 
ID4452723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2967407 
End bp2968444 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content69% 
IMG OID639697896 
Productalcohol dehydrogenase 
Protein accessionYP_839461 
Protein GI116693928 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID[TIGR02824] putative NAD(P)H quinone oxidoreductase, PIG3 family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGA TCGAAATCGT GCGGCCCGGC GGCCCCGACG TGCTCGTGCC GGCGACCCGG 
GCCGTACCGG TGCCGGGCCC CGGCGACGTG CTGATCCGGA TTCACGCGGC CGGCGTCAAC
GGCCCGGACG TATTCCAGCG CAAGGGGCTG TACGATCCGC CGCCCGGCGC GTCCGACATT
CCCGGCCTCG AGATCGCCGG CGAGGTCGTC GCGGTCGGGC GCGACGTCAC GCGGTTCGTC
GTCGGCGATC GCGTCTGCGC GCTGATTCCC GGCGGCGGCT ACGCGGAATA CGCGGTGGCG
AACGAGAGCA ACACGCTCGC GATTCCCGAC GGCCTCGGGA TGGCCGAGGC AGCGGCGCTG
CCGGAGACCT TCATGACGGT CTGGCTGAAC CTGTTCCAGC GCGGTCGGTT TTCCCCCGGT
GAAAGCGTGC TGATCCACGG CGGCGCGTCG GGCATCGGTA CGACGGCGAC GATGCTGGCG
AAGGCGTTCG GCGCGGCGAC GATCATCACC ACCGTCGGGT CGGACGCGCA GCGCGACGCG
AGCATGCGGC TCGGCGCGGA TCTCGCGATC GACTATCGCA GCGAGGATTT CGTCGAGGCA
GTCGCGCGCT TCACGGGCGG CAAGGGCGTC GACGTGATCG TCGACATCAT CGCGGGCGAC
TACGTCGCGC GCAATTTCGC GGCGGCCGCG ATGAACGGGC GCATCGTGCA GATCGGCGTG
ATCAATGGCC CCGCGAAGGA GCTCGATCTG TTTCCGATGC TGACGAAGCG GCTCACGCAC
ATCGGCTCGA CGCTGCGCTC GCGCACTTAC GCGGAGAAGG CGCAGATCAT TCGCGAGCTC
GAGGAGGCCG TGTGGCCGCT GATCCGGCAA GGCACGGTCA GGCCGCAGGT CTATCGGCTG
TTCGATTTGC GCGACGCGCG CGCGGCGCAC GAGCTGATGG ATTCGGGACG GCATATCGGC
AAGATCGTGC TGGCGACGCC GGCCGCGGAT CATGCGCTTC GGGCTGCCAT CGACGCAAAC
GCCAAGCATT CCACATGA
 
Protein sequence
MTAIEIVRPG GPDVLVPATR AVPVPGPGDV LIRIHAAGVN GPDVFQRKGL YDPPPGASDI 
PGLEIAGEVV AVGRDVTRFV VGDRVCALIP GGGYAEYAVA NESNTLAIPD GLGMAEAAAL
PETFMTVWLN LFQRGRFSPG ESVLIHGGAS GIGTTATMLA KAFGAATIIT TVGSDAQRDA
SMRLGADLAI DYRSEDFVEA VARFTGGKGV DVIVDIIAGD YVARNFAAAA MNGRIVQIGV
INGPAKELDL FPMLTKRLTH IGSTLRSRTY AEKAQIIREL EEAVWPLIRQ GTVRPQVYRL
FDLRDARAAH ELMDSGRHIG KIVLATPAAD HALRAAIDAN AKHST