| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5832 |
|---|
| Symbol | |
|---|
| ID | 4452578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 2961574 |
|---|
| End bp | 2963253 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639697893 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_839458 |
|---|
| Protein GI | 116693925 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.591382 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGACTT TCGTGCATTC GTCATACCCG TACCCGCAAG ACGAACCGGC ACCGTCCGGC
CATGCGTATC CGCTGCTGAT CAAGCAGTTG CTTCATGCGC CGCTGGCGAC GCGGCCCGAG
CAGGAAATCG TGTACGGCGA CCGGGTTCGG CACGATTACT GGACGTTCCG GCATCGCATC
GGGCAACTCG CGAGCGGACT GTCGTCGATC GGTGTCGGCG CGGGCGACGT CGTCGCCGTG
CTGGACTGGG ACAGCCATCG CTACCTGGAG TGCTACCACG CGATTCCGAT GATGGGCGCG
GTGCTGATGA CGGCCAATGT CCGGCTGTCG CCCGACCAGT TGCTGTATAC GCTCGACCAT
TCGGGCGCGC GCGTCGTGCT GGTTCACCGC GACTTCCTGC CGTTGTGGGC GGGCATGCGC
GACCGGCTCG ACACGGTGCG GCACGTCGTG CTGATCGCCG ACGGCGACGA AACCGGATTG
CCGGACGGTT TCACCGACGA ATACGAGGCG CTCGTCGCGG CCGGTTCGCC CGATTTCGCG
TTCCCCGATT TCGACGAGCA GACCCGCGCG ACGACGTTCT ACACGACCGG CACCACCGGC
CTGCCGAAGG CGGTGGCGTT CACCCATCGG CAGCTCGTGC TGCACACGCT CGCGGGCATG
GCGGCGTTGT CGAGCGCGCG CGATCGCGGC CGCGTGCATC GCGACGACGT CTACATGCCG
ATCACGCCGA TGTTCCATGT GCACGCCTGG GGAATGCCGT ACATCGCGAC CGCGCTCGGG
CTCAAGCAGG TCTATCCGGG CCGTTATTCG CCGGACGGAT TGGTCGCGCT GATCGCGCGC
GAAGCGGTGA CGTTCTCGCA TTGCGTGCCG ACGCTGCTCG CGATGATTCT CGACAGCCCG
GCGTCGGCGG CGGCCGACCT GTCGGCGTGG AAGGTGATCG TCGGTGGCTC ACCGCTGTCC
GACGGGCTGG CGCGGGCGGC GCTCGCGCGC GGGATCGAGG TCTACACCGG GTACGGGATG
TCGGAAACCT GCCCGCTGAT GACGATCGCG CAGATCGACC CGCCGCGCGC GGCCGGCGGC
GCATCGGCCG ACGACGACAT CGCGCGCCGG ACGAAGGCGG GGCTGCCGCT GCCGCTCGTC
GACCTGCGCA TCGTCGACGC GCAGTTTCGC GACGTGCCGC ACGACGGCCG CTCGGCGGGC
GAGGTCGTCG TGCGGATGCC GTGGGCGACG CAAGGCTATC TGGGCGATGC GCCGGCGTCG
GCCGCGCTGT GGGCCGGCGG CTATCTGCAT ACGAACGACA TCGGCGTGAT CGATTCCGAC
GGCCGGCTGC AGATCACCGA CCGCATCAAG GACGTGATCA AGACGGGCGG GGAATGGGTC
TCGTCGCTCG AACTCGAGAG CATCCTGTCG CGTCATCCGG CCGTGCGCGA ATCGGCGGTG
ATCGGCGTGA AGGATGCGCG CTGGGGCGAG CGTCCGCTCG CGCTGGTCGT GCTGACCGAC
GAGCAGGTCG GTCGCGTCGA GCCGGAGGAA TTGAAAGCCC ATGTGAAGCA GGTGGCCGAT
CGCGGGCTGA TCTCGCGCTA TGCGGTGCCG GAGCGGCTGC TGATCGTCGA CGCGATCGAG
AAGACGAGCG TCGGGAAGAT CAACAAGCGC GCGTTGCGCG AGCGGTACCA GCCCGACTGA
|
|---|
| Protein sequence | METFVHSSYP YPQDEPAPSG HAYPLLIKQL LHAPLATRPE QEIVYGDRVR HDYWTFRHRI
GQLASGLSSI GVGAGDVVAV LDWDSHRYLE CYHAIPMMGA VLMTANVRLS PDQLLYTLDH
SGARVVLVHR DFLPLWAGMR DRLDTVRHVV LIADGDETGL PDGFTDEYEA LVAAGSPDFA
FPDFDEQTRA TTFYTTGTTG LPKAVAFTHR QLVLHTLAGM AALSSARDRG RVHRDDVYMP
ITPMFHVHAW GMPYIATALG LKQVYPGRYS PDGLVALIAR EAVTFSHCVP TLLAMILDSP
ASAAADLSAW KVIVGGSPLS DGLARAALAR GIEVYTGYGM SETCPLMTIA QIDPPRAAGG
ASADDDIARR TKAGLPLPLV DLRIVDAQFR DVPHDGRSAG EVVVRMPWAT QGYLGDAPAS
AALWAGGYLH TNDIGVIDSD GRLQITDRIK DVIKTGGEWV SSLELESILS RHPAVRESAV
IGVKDARWGE RPLALVVLTD EQVGRVEPEE LKAHVKQVAD RGLISRYAVP ERLLIVDAIE
KTSVGKINKR ALRERYQPD
|
|---|
| |