Gene Bcen2424_5822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5822 
Symbol 
ID4452568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2949143 
End bp2950111 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content72% 
IMG OID639697883 
ProductBNR repeat-containing glycosyl hydrolase 
Protein accessionYP_839448 
Protein GI116693915 
COG category[R] General function prediction only 
COG ID[COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGA CGCTCGTTGC CGGTACCGCG CTCTGTGCCG CCGTGGCGGC CTTCGCGCAA 
CCGCAGGATG GAACGGTGGC GGCCTGGGCC GCGAAGCCCG CGCATGCGTG GGCCGCGCCG
ACGCACCGGA TGCTGATGGA TGCGGCGCAT GCCGGAGCGC GGATCGTCGC GGTCGGCGAG
CACGGCATCG TGCTGCTGTC CGACGACGAC GGCAGGACCT GGCGGCAGGC GCGGCGCGTG
CCGGTGTCCG CGACGCTGTC GGCCGTGTCG TTCGCGGATG CGAAGCACGG CTGGGCAGTC
GGCCAGTGGG GCGCGATTCT CGCGACCGAC GACGGCGGCG ACACATGGGT CACGCAGCGG
CTCGATACGT CGGTCGATCA GCCGCTGTTC TCGGTGCTGT TCACGAATGC GCGGGACGGG
ATTGCCGTCG GCCTGTGGTC GCTGATGCTG CAGACGCACG ACGGCGGCAA GACATGGGCG
CGCACGACGC TGCCGAAGCC GCCGGGCGGC GGCAAGGCCG ACCGCAATCT CTATCACGTG
TTTGCCGACC CCGCCCATGC GCTCTACGTC GTGTCCGAAC AGGGGATGGT GCTCAAGTCG
GCCGACGGTG GCGCGAACTG GGTCTATCTG CCGACGGGCG GCAAGGGCAC GTTGTGGTCG
GGCGTCGCGA TGCCGGACGG CCGGATCGTG GTCGGCGGGC TGCTCGGCAG CCTGTTCGAG
AGCCGCGACG GCGGCGCGAC GTGGGCGGCG CTGCAGACCG GCACGCGCAG CTCGATCACC
GATCTCGTCG CGACCGGCGG CGGGCTGACC GGCGTCGGGC TGGACGGCCT CGTGCTGACG
CAGCGCGTGG CCGGCGGCCC GTTCGACGTC GCGCAGCGCG CGGATCGGGC GACGCTCACC
GCCGCGCTGA TCGACGCGCG CGGCAAGCCG GTGCTGTTTT CGCAGGACGG CGTGCTGGCC
GCGCCGTGA
 
Protein sequence
MIKTLVAGTA LCAAVAAFAQ PQDGTVAAWA AKPAHAWAAP THRMLMDAAH AGARIVAVGE 
HGIVLLSDDD GRTWRQARRV PVSATLSAVS FADAKHGWAV GQWGAILATD DGGDTWVTQR
LDTSVDQPLF SVLFTNARDG IAVGLWSLML QTHDGGKTWA RTTLPKPPGG GKADRNLYHV
FADPAHALYV VSEQGMVLKS ADGGANWVYL PTGGKGTLWS GVAMPDGRIV VGGLLGSLFE
SRDGGATWAA LQTGTRSSIT DLVATGGGLT GVGLDGLVLT QRVAGGPFDV AQRADRATLT
AALIDARGKP VLFSQDGVLA AP