| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5820 |
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| Symbol | |
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| ID | 4452566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia HI2424 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008543 |
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| Strand | + |
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| Start bp | 2946434 |
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| End bp | 2948794 |
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| Gene Length | 2361 bp |
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| Protein Length | 786 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639697881 |
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| Product | RND efflux transporter |
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| Protein accession | YP_839446 |
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| Protein GI | 116693913 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCAATC GTCTGGTCAG TCGCCTGGAA AGGCTCTTCT TCGGTCATCG CGCGATCGTG
CTCGCGGCGA TCGCGTTGTT CACCGTCGCG ATGGCCGTGT TCGCCGTGCA ACTGCGCATG
GATGCCGGCT TCGACAAGCA GATGCCGATC GGGCACGAGT ACATCCGCAC GTTCCAGCAG
TATCGCAACG ACCTGCTCGG CGCGAACCGG ATCACGGTGG TGGTGCGCGC GAAGCACGGC
TCGATCTGGT CGAAGCAGGG GCTGACGCGG CTATACGACG TCACGCAGGC CGTCACGTAC
CTGCCGAACG TCGACCGGAT CGGCGTGCGC TCGTTGTGGA CGCCGAACGC GTTCGTCAAC
GAAGTGACCG ACGAAGGGTT TCGCGCGGAG CCGATCATTC CGGGCACCAT CACGCCGGAC
CAGCTGACGC CGGACCGCGT GCAGGGCATT CGCCGCGCGA CCACGCTCGG CGGCTACGTC
GGCACGCTCG TGTCGCACGG CGAGGACAGC GCGATGATCA CGGCCGAGCT GAACGAGCGC
GACAGCGCCG GCAAGGTGCT CGACTACGTG GCGTTCAATC ACCTGCTCGA GGAGAAGATC
CGCAAGCCGT TCGAGGATGC CGGCTACGAG ATCCAGATCA TCGGCTTCGC GAAGCAGATT
GGCGACATCG CCGACGGCGC GACGGCCGTG CTCGGCTTCT GCGCGGTCGC GCTGTTGCTG
ACCACGCTCG CGGTGTACTG GTACTGCCAT TCGGTGCGCT TCACGGTGCT GCTGGTCGCG
TGTTCGCTCA CGTCGCTCGT GTGGCAGTTC GGCACGCTGA AGCTGCTCGG CTTCGGCCTC
GATCCGCTCG CGGTGCTCGT GCCGTTCCTC GTGTTCGCGA TCGGCGTGTC GCACGGCGTG
CAGCAGGTGA ACTTCATCGT CCGCGAGATC GCGCACGGGC AGAGTTCGTT CGATGCGGCG
CGCCACAGCT TCAGCGGCCT GCTGATCCCC GGCGTGCTCG CGCTGATCAC CGCGTTCGTG
TCGTTCATCA CGCTGTTGCT GATCCCGATC CCGATGGTGC GCGAGCTGGC GATCACCGCG
TCGCTCGGCG TCGCGTACAA GATCGTGACG AACCTGATCC TGCTGCCCGT CGCGGCATCG
TGCTTCAACT TCACGAAAAC CTATGCGGAC GCTTCGCTGA AGCGCGCGCA GCAGCGTGCG
AAGCCGCTGC GCGTGCTCGC CCGCGTGGCG GAGCCGAAGT ACGCGGGCAT CACGGTCGCG
CTGACGGTGG CGATCTTCGC CCTCGCCGCA TGGCAAAGCC GCGATCGCGT GATCGGCACG
CTGCAGCCGG GCGCGCCGGA ACTGCGCGCG GACGCGCGCT TCAATCGCGA TGCGACGTCG
ATCGCCGGCA ACTACGACAT GGGCCTCGAC TGGCTGACGG TGGCGATCGA ATCGACCGGC
AAGGCATGCG ACAACCCGGC GGTCGGGCTG TACGAGGACG ACTTCTCGGC CGCGATGAAG
ACCGAGCCGG GCGTCGTGTC GGTGCAGTCG TACTCGGCGA TGCTGCGCGC GTACAACCAG
GGCTACAACG AGGATTTCCC GAAGATGAAC GTCGTGCCGA TCGCCGCCGA GAACTACGGC
GCGGTGTCGG TCGACGTGTC GCGCCTGAAG GGCTTCATGA GCCGCGACTG CGGGATGACG
GCCGTGCACC TGTTCCTGAC CGACCACAAG GCGACGACGA TCAACCGCAT CCTCGACGAC
GTGAAGCAGT ACCGCGCGTC GCATCCGTTC CCCGGCATCA CGGTGCGGCT GGCCGCCGGC
AACGCGGGCG TGCTCGCCGC GACCAACGAC GAGGTCGAGA AGAGCGAGCT GCCGATGATG
CTCTACGTGT ATGCGGCGAT CCTGGTGCTC GTGTTCCTCG CCTACCGCGA CTGGCGCGCG
ATGCTCGCCT GTTGCGTGCC GCTGTCGGTC GCGACCTTCA TCGGCTACTG GTTCATGAAG
GAGCTGCAGA TCGGGCTGAC CGTCGCGACG TTGCCGGTGA TGGTGCTGGC CGTCGGCATC
GGCGTCGATT ACGCGTTCTA CATCTACAAC CGGCTGCAGG TGCATCTCGC CGGCGGGCAG
GACATCGTGA AGGCCGTGCA GTACGCGATG CTCGAAGTGG GCGTGGCCAC GATCTTCACC
GCGATCACGC TGGCGATCGG CGTGGCGACG TGGAGCTTCT CGGCGCTCAA GTTCCAGGCG
GACATGGGCA AGCTGCTCGC GTTCATGTTC ATCGTGAACC TGGTGATGGC GATGACCGCG
CTGCCCGCGC TCGCGTCGCT GCTCGAACGC TGGTTCCCGC GCCGCAAGCC GGCTCGCGCG
CCGGGCCTGT TCAGTCACTG A
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| Protein sequence | MLNRLVSRLE RLFFGHRAIV LAAIALFTVA MAVFAVQLRM DAGFDKQMPI GHEYIRTFQQ
YRNDLLGANR ITVVVRAKHG SIWSKQGLTR LYDVTQAVTY LPNVDRIGVR SLWTPNAFVN
EVTDEGFRAE PIIPGTITPD QLTPDRVQGI RRATTLGGYV GTLVSHGEDS AMITAELNER
DSAGKVLDYV AFNHLLEEKI RKPFEDAGYE IQIIGFAKQI GDIADGATAV LGFCAVALLL
TTLAVYWYCH SVRFTVLLVA CSLTSLVWQF GTLKLLGFGL DPLAVLVPFL VFAIGVSHGV
QQVNFIVREI AHGQSSFDAA RHSFSGLLIP GVLALITAFV SFITLLLIPI PMVRELAITA
SLGVAYKIVT NLILLPVAAS CFNFTKTYAD ASLKRAQQRA KPLRVLARVA EPKYAGITVA
LTVAIFALAA WQSRDRVIGT LQPGAPELRA DARFNRDATS IAGNYDMGLD WLTVAIESTG
KACDNPAVGL YEDDFSAAMK TEPGVVSVQS YSAMLRAYNQ GYNEDFPKMN VVPIAAENYG
AVSVDVSRLK GFMSRDCGMT AVHLFLTDHK ATTINRILDD VKQYRASHPF PGITVRLAAG
NAGVLAATND EVEKSELPMM LYVYAAILVL VFLAYRDWRA MLACCVPLSV ATFIGYWFMK
ELQIGLTVAT LPVMVLAVGI GVDYAFYIYN RLQVHLAGGQ DIVKAVQYAM LEVGVATIFT
AITLAIGVAT WSFSALKFQA DMGKLLAFMF IVNLVMAMTA LPALASLLER WFPRRKPARA
PGLFSH
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