| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen2424_5818 |
|---|
| Symbol | |
|---|
| ID | 4452564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia HI2424 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008543 |
|---|
| Strand | + |
|---|
| Start bp | 2942950 |
|---|
| End bp | 2944449 |
|---|
| Gene Length | 1500 bp |
|---|
| Protein Length | 499 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639697879 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_839444 |
|---|
| Protein GI | 116693911 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGCG GCCCGCCGGA ACCCCGGCCG GCCACGATCA GGGCGCGACG TCATCGTCGA
TTGACGGCGA CGATCGAAAC AAACGCGTTT CGTCCGGAAT GGGCGAGCGA AGGCGGAGCA
GGAAGGAGAA CCATGATGAA GAAGCATCGT TTCTGGACCA CGTCCGCGAT CGCGGCCGCT
GCATGTGTCG CGATCGGCAC CGCCGTCGCG GCGGACGACC TGACGCCGGC CGGCGCCGAC
CGCTCGGCAA GCAAGGACGG CGCGGTGCCG ACTTATGCGG GCAAGCAGTC GCCCGACGCC
GGCTGGGAGT GGGGCAAGGT GCGCGGCGAT TTCTGGAAGC ATCGCAACGA GAAGCCGCTC
TATTCGATCG ACGCGGCGAA CGTCGACAAG TATGCGGACA AGCTGTCGCC CGGCCAGGTC
GCGCTGATCA AGCAGAAGAA GGGCTACCGG ATGGACGTCT ACCCGTCCCA CCGCGAATGC
CAGTTGCCGG ATGCCGCCGA GCAGAACTCG AAGGCGAACC TCACGGCCGC GAAGCTGGAT
GCGAGCGGCG AGAACCTCGC CGCGGCCGCG TTGCCGGGCG TGCCGTTCCC GCAACCGAAG
AGCGGCATCG AAGCGATCCT GAACTACGAG ATGCGTTATC GCGGCGAAGG CGTCGAATGG
GCGCAGGTCG CCACGAGCAT TTCGCCGCGC CCCGGCAGCA GCGAATGGAT CGACGCGGTC
GGTCCGCAGA CGTTCTACTT CCCGTCGGCC AAGCTCGGCA AGACCTCGCC GCAGGACGTC
GACCAGTTGA GCGCCGCCGT CTACTTCCAG ATGAACTCGC CGGCCGCGCT GGCCGGGCAG
GCCTTCGTCC AGCGGCAGTA CTTCAACAAG GACTCGGAAA CCTACTACTA CTTCCCGGGC
CAGCGCCGCG TGCGACGCAT GCCGGCCTAT ACGCACGACG CGCCGTTGAT CGGCTTCGAG
AACCAGTACC TGATCGACGA GGCCAACATG ATCAACGGCT CGCTCGACCG GTTCAACTGG
AAGCTGGTCG GCAAGAAGGA AATGCTGGTC CCGTACAACG AGTTCGGCAT GTACCGGTTC
AAGAGCAAGC TGCACGACGT CGCGACGCCC GACGGCCTCG CTGCGGCGAA CCGTCGCTAC
GAGACGCATC GCGTGTGGGT CGTCGAGGCG ACGCTGAAGC CGAGCGCGCG ACACGTCGCG
TCGAAGAAGG TGTTCTATCT CGACGAAGAC AGCTGGCTCG CGCTCGTCGG TGAGGACTAC
GACGCGCAGG GCAAGCTGTG GAAGGTGCGG GAAAGCTACC CGATTCCGGT ATGGGAACTC
GGCGGCACCT GCGACAACGA ACCGCTCGCG CAGTACGACA TGATCAACGG CCGCTACGTA
TTCGATGCGT CGTCGATTGG CCAGGGCAAG GACATTCGCT GGTTCGGTCA GGCCGACGAT
CCGCGCTTCA AGCAGGATTT CTACACCGCG GAATCGCTGC GCTCGGTCAG CGAACGTTGA
|
|---|
| Protein sequence | MARGPPEPRP ATIRARRHRR LTATIETNAF RPEWASEGGA GRRTMMKKHR FWTTSAIAAA
ACVAIGTAVA ADDLTPAGAD RSASKDGAVP TYAGKQSPDA GWEWGKVRGD FWKHRNEKPL
YSIDAANVDK YADKLSPGQV ALIKQKKGYR MDVYPSHREC QLPDAAEQNS KANLTAAKLD
ASGENLAAAA LPGVPFPQPK SGIEAILNYE MRYRGEGVEW AQVATSISPR PGSSEWIDAV
GPQTFYFPSA KLGKTSPQDV DQLSAAVYFQ MNSPAALAGQ AFVQRQYFNK DSETYYYFPG
QRRVRRMPAY THDAPLIGFE NQYLIDEANM INGSLDRFNW KLVGKKEMLV PYNEFGMYRF
KSKLHDVATP DGLAAANRRY ETHRVWVVEA TLKPSARHVA SKKVFYLDED SWLALVGEDY
DAQGKLWKVR ESYPIPVWEL GGTCDNEPLA QYDMINGRYV FDASSIGQGK DIRWFGQADD
PRFKQDFYTA ESLRSVSER
|
|---|
| |