Gene Bcen2424_5808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_5808 
Symbol 
ID4452413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp2933371 
End bp2934642 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content69% 
IMG OID639697869 
Productmajor facilitator transporter 
Protein accessionYP_839434 
Protein GI116693901 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.499125 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAACG ACCATCGTCA ACGGCGCCAC ACATTGTGGC TGCTGTGCGC GCTTTCGTTC 
ATCCTCTACG TCGATCGCGT CAATCTCGCG ACCGCCGCCG GCGCGATCAA GGCCGAACTC
GGGCTATCGA ATACCGAGCT CGGCGTCGCA TTCTCCGCGT TCGCGTATTC GTATGCAATC
TGCCAGATCG GCGGCGGCTG GATCGCCGAC CGGTTCGGCG CGCGCATCAC GTTGATCGGC
TGCGGGCTGA TCTGGGTCGT CGCCACGTTC ACGACCGGGC TCGTGCACAG TCTCGGGCTG
CTGTTCGCCG CGCGGCTGCT GCTCGGCATC GGCGAAGGCG CGACGCTGCC GGCCCAGGCC
CGAGCGGTCA CGCACTGGTT CCCGCGCGAG CGGCGCGGCG TCGTGCAGGG CTTCACCCAT
TCGTTCTCCC GGCTCGGCAA CGCGGTCACG CCGCCGATCG TCGCCGCGCT GATGACGTGG
CTGTCGTGGC GCGCGGCGTT CTTCGTGATC GGCGCGGTCA CGCTGGTGTG GCTCGCGTGG
TGGATCGTCG GCTTCCGCGA GCATCCGGCG GGCGACGACG ACGGCCGCAC GCGCACCGCG
CGCCCTGCCG CACCGTCCGG CCCGACGCCG TGGGGGCCGC TGTTCCGACG CATGGCGCCG
ACCATCTTCG TCTACTTCTG CTACGGCTGG ACCGCGTGGC TGTTCTTCAC GTGGTTGCCG
ACCTTCTTCC TGAACGGCCA GGGCCTGAAC GTGAAATCGA CCGCGTTGTT CGCGTCCGGT
GTGTTCTTCG CGGGCGTGGT CGGCGATACG CTCGGCGGCT GGCTCTGCGA CCGGATCTAC
CGAAAGACCG GCAACCTCGC GCTGTCGCGC CAGAGCGTGA TCGTCACGAG CTTCGTCGGC
GCGCTCGTCT GCTTGCTGCC GCTCGCGTTC GTGCACTCGA CGGCCGGCGT CGCGCTGTGC
CTGTCGGGAT CGTTCCTGTC CCTCGAACTG ACGATCGGGC CGATCTGGGC CGTGCCGAGC
GACATCGCGC CGACCCATGC CGGCATCGCG AGTGGGATGA TGAACGCCGG TTCCGCGATC
TCGGGAATCC TGTCGCCGAT CCTGTTCGGC TATCTCGTCG ATCGCACCGG CAGCTGGACG
GTGCCGTTCG TCGGCTCGGT CGCGATGCTG CTGATCGGCA TCGTCGCCGC GCTGCGGATT
CGCCCGGACC GCGCGCTGTC CGAATCGATG CCGGCGCTCG TCGACGCGCC TGCTGCGCCG
TCGGTGCGCT GA
 
Protein sequence
MPNDHRQRRH TLWLLCALSF ILYVDRVNLA TAAGAIKAEL GLSNTELGVA FSAFAYSYAI 
CQIGGGWIAD RFGARITLIG CGLIWVVATF TTGLVHSLGL LFAARLLLGI GEGATLPAQA
RAVTHWFPRE RRGVVQGFTH SFSRLGNAVT PPIVAALMTW LSWRAAFFVI GAVTLVWLAW
WIVGFREHPA GDDDGRTRTA RPAAPSGPTP WGPLFRRMAP TIFVYFCYGW TAWLFFTWLP
TFFLNGQGLN VKSTALFASG VFFAGVVGDT LGGWLCDRIY RKTGNLALSR QSVIVTSFVG
ALVCLLPLAF VHSTAGVALC LSGSFLSLEL TIGPIWAVPS DIAPTHAGIA SGMMNAGSAI
SGILSPILFG YLVDRTGSWT VPFVGSVAML LIGIVAALRI RPDRALSESM PALVDAPAAP
SVR