Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen2424_5798 |
Symbol | |
ID | 4452403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia HI2424 |
Kingdom | Bacteria |
Replicon accession | NC_008543 |
Strand | - |
Start bp | 2922282 |
End bp | 2923103 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639697859 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_839424 |
Protein GI | 116693891 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0787233 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCCGCC GCGGCCCCGC CGCCACCACC GCTTCCACCG TCGCGATCGC CGGCGCGATC CTGCTCGTCG CCGCGTTCCC GCTGTTCTGG GCCGTGCTCA ATTCGCTCAA GCACCTGCTC GACATCGTCA CGCCGACGCC GCGCTTCTTC TTCACGCCGA CGCTCGCGAA CTACGAACAG GTGCTGTCGA GCCCCGAGGT CTTGATCGGG CTCGGCAACA GCATCGCGAT CGTCGGCGCG GCCGTGCTGA TCGGCGCCGT GCTCGGCGTG CCGGCCGCGT ACGCAATCGC GCGCTACCCG ATACGCGGCA AGCGCGACAT CCAGTTCTTC CTGCTATCGC TGCGCTTCCT GCCGCCCGTC GCGGTCGCGC TGCCGCTGAT CGCGATCTGG GTCGATCTCG GGCTGTACGA CACCAAGCTG TCGATGATCG TCACGTACCT GCTCGTCACG CTGTCGACCA TCACGTGGCT GTCGATCCCC GTGTTCCGCC GGCTGCCGCG CGAGATCGAG GAGGCCGCCG CGCTCGACGG CTACGGCCCG TACGCGGTGT TCTGGCATAT CGCGCTGCCG GTGTGCGCGA GCACGCTGCT CGGCGGCATC GTGTTCAGCT TCGTGCTGGT GTGGAACGAA CTGATGATCG CGCTCGCCCT CACGTCGTCG CGCAGCGCGA CGCTGCCGGT GGTCGCGTCC GCGTTCACGT CGCTCGGCCA GGAAGTGCCG TGGGGCGTGA TCAACGCGTC GACGGTGCTG CTCGCGCTGC CGCCGCTCGT TTTCGTCGGC ATGCTGAGCC GGCTGCTCAA TTCGATGGTC AAGGGAAAAT AA
|
Protein sequence | MARRGPAATT ASTVAIAGAI LLVAAFPLFW AVLNSLKHLL DIVTPTPRFF FTPTLANYEQ VLSSPEVLIG LGNSIAIVGA AVLIGAVLGV PAAYAIARYP IRGKRDIQFF LLSLRFLPPV AVALPLIAIW VDLGLYDTKL SMIVTYLLVT LSTITWLSIP VFRRLPREIE EAAALDGYGP YAVFWHIALP VCASTLLGGI VFSFVLVWNE LMIALALTSS RSATLPVVAS AFTSLGQEVP WGVINASTVL LALPPLVFVG MLSRLLNSMV KGK
|
| |